| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02037 |
|---|
| Symbol | |
|---|
| ID | 6775907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2209533 |
|---|
| End bp | 2210246 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642755472 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002126333 |
|---|
| Protein GI | 196156844 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.216059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACCTA TCAACGCCAC TTATTTACAA GCCACTCCCC TACTTGATTT CGATACGCCC
GCTATTCAGA CGCTTATTGC CGAAAAGGAG TGGCAGTCAC TGACTACCTC TGAGCGTATT
GGTGCTATTT ACCACTTTAT ACAAAACGAT GTCGCATTTG GGTATAACAA ACGTGATGAT
ATAGCTGCTT CGGAGGTGCT TAAAGATGGT CTTGGTCAAT GCAATACCAA GGCAACCTTA
CTGATGGCAC TGTTAAGGGC AACCGGTATT GCATGTCGTT TGCATGGGTT TACCATCGAT
AAGCGATTGC AAAAAGGTGC TATCACGGGC TTACTGTATA TACTCGCCCC ACGGCTAATC
ATTCATAGCT GGGTAGAAGT ACAACATGAC AAAGAGTGGA TCTCGTTGGA AGGCTTTATT
CTCGATAACG GCTATTTAAA CAGTGTTCAA AAGCGATTCC CAAAAGCTAC GACGTTTTCA
GGTTACGCCA TCGCCACTAA AAACCTGCAA TCACCTAACA TTGCTTGGTG TGGAAAAAAC
ACTTTCATTC AAAGTGAAGG GATTGTCGAT GATTTTGGCA TTTTTGATTC TCCCGATACG
TTTTATCAAG CCCATGGTAA TAATTTAAAG GGATTCAAAT CCTTTTTATA TGAAAATATT
TTACGGCATA GTTTGAACCG GCGAATCGAC TACATCCGTT CAAACAAGCT TTAG
|
|---|
| Protein sequence | MSPINATYLQ ATPLLDFDTP AIQTLIAEKE WQSLTTSERI GAIYHFIQND VAFGYNKRDD
IAASEVLKDG LGQCNTKATL LMALLRATGI ACRLHGFTID KRLQKGAITG LLYILAPRLI
IHSWVEVQHD KEWISLEGFI LDNGYLNSVQ KRFPKATTFS GYAIATKNLQ SPNIAWCGKN
TFIQSEGIVD DFGIFDSPDT FYQAHGNNLK GFKSFLYENI LRHSLNRRID YIRSNKL
|
|---|
| |