Gene MADE_02030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02030 
Symbol 
ID6775635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2198855 
End bp2199670 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content44% 
IMG OID642755465 
ProductCo/Zn/Cd efflux system component 
Protein accessionYP_002126326 
Protein GI196156837 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.434455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTTCA CCATTATCGA GTTTATTGGT GGCTGGCTAA CGAACAGTAC CGCTATTATG 
GCGGACGCTG TTCATGATTT AGGCGATAGT TTATCGATTG GCACCTCATG GGGCTTAAAC
AAGCTCAGTG ATAAAGATGC TAATCGTACA TTTTCGTATG GCTATAAACG ATTTTCACTT
CTGGGGGCGT TAATTAATGG TGTTGTGCTG ACTATTGGTT CCGTTTGGAT ACTATTTGAA
GCCATTCCCA GGCTGGCCGA GCCTGAGATG CCGCAAGTGG AAGGAATGCT GTTATTGTCG
ATTTTTGGCA TGGCAGTGAA TGGCTTTGCT GCTTATAAAC TCAGTGAGGG TAACTCGCTC
AACGAGCGCG TGCTCAATTG GCACCTACTC GAAGATGTCC TGGGTTGGGT GGCCGTATTT
ATCGTATCGA TTGTATTGAT GTTCAAGCCT TGGGCGATTT TAGATCCCAT TTTATCCATC
GGTTTTACCT TATTTATTCT TTTCAATGTG ATCCGTAATT TAAAACAAAC CTTAATGTTG
TTTTTGCAAG CCACGCCCGA TAAAGCGCAA CTTGAACGCA TCCGAGATGA TTTGTTGTCA
AATGAACACG TCAGTGACCT ACACCATTTT CATATTTGGT CGCTCGATGG TGAGCGCAAT
GTGATGACCG TTCACTTAGT GTTAGTTGGA GATGTGTCCA CAGAGCATAT TCAAACGCTT
AAAAATGACG TACAGCACTC ACTCAAGAAA TATAATTTTG AGCATACGAC AGTCGAGTTT
GAGTTTGCGG ATGAACAATG CCGTGACGAG GCGTAA
 
Protein sequence
MVFTIIEFIG GWLTNSTAIM ADAVHDLGDS LSIGTSWGLN KLSDKDANRT FSYGYKRFSL 
LGALINGVVL TIGSVWILFE AIPRLAEPEM PQVEGMLLLS IFGMAVNGFA AYKLSEGNSL
NERVLNWHLL EDVLGWVAVF IVSIVLMFKP WAILDPILSI GFTLFILFNV IRNLKQTLML
FLQATPDKAQ LERIRDDLLS NEHVSDLHHF HIWSLDGERN VMTVHLVLVG DVSTEHIQTL
KNDVQHSLKK YNFEHTTVEF EFADEQCRDE A