Gene MADE_01897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01897 
Symbol 
ID6775786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp2045819 
End bp2046442 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content45% 
IMG OID642755333 
Producttranscriptional regulator, TetR family protein 
Protein accessionYP_002126195 
Protein GI196156706 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0111118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGGC ATACTAAAAG CGATATTGTA GATGCGGCAG AGTTTCTGTT TTCTCAAAGC 
GGGTTTACAC AAACTTCCAT GCGAGATATT ACTGCAAGAG CCGGCGTCAA TTTAGCGTCG 
GTTAACTATC ACTTTGGCAG TAAGAAAAAC CTTATTCAGG CGGTATTTAA GCGCTACTTT 
GACCATCTAA TGCCGCAAGT ACAGTCGTGC TTAGCTGAAA TTCAGCCTAG TAAGGGGGCA 
AAAGGGGTAG AGCAGCTGCT GTATTCACTC ATTCCCCCAA TGTTAGACTT AAACGAATTG 
TCGCCTCAGG GCACCGCAAC CTTTGTAAAA CTACTTGGCC GCGGGTATAA CGAAACCCAA 
GGCCATTTGC GTAAGTTTAT AATGACTGAT TATGGTGATT GTATTAGAAC ACTTGTGAAT 
GCCATTAGGC AGTGTTTGCC AGACTTGCCT GAAGAGGAGT TATTCTGGCG TCTTCATTTT 
GCAATGGGGA GCTTTGTATT TTCAATGGCA TCAAGTCAGG CATTGACAGA GATAGCCGAG 
TCGGATTTTC ACAAGCACGT CAATATCGAA GAGGTGATAA ACCACCTTGT TCCGTTTGTT 
GCTCAGGGCT TAACAGGCAG GTAA
 
Protein sequence
MARHTKSDIV DAAEFLFSQS GFTQTSMRDI TARAGVNLAS VNYHFGSKKN LIQAVFKRYF 
DHLMPQVQSC LAEIQPSKGA KGVEQLLYSL IPPMLDLNEL SPQGTATFVK LLGRGYNETQ 
GHLRKFIMTD YGDCIRTLVN AIRQCLPDLP EEELFWRLHF AMGSFVFSMA SSQALTEIAE 
SDFHKHVNIE EVINHLVPFV AQGLTGR