| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01881 |
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| Symbol | |
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| ID | 6775607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2016697 |
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| End bp | 2019747 |
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| Gene Length | 3051 bp |
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| Protein Length | 1016 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642755317 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002126179 |
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| Protein GI | 196156690 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.529383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAT TCAAACCCAG CACTATCATG GCGGCCTTGA TAAGTAGTGG GGTCGCGTTT
AGCGCAGCTC CTCTTTATGC CCAAGAGTCT CCAGACACCT CAATAGACGA AGTTGAACGA
CCACAAGAAG ATACCTTAGA GCGTATTGAA GTACGTGGTT TTAGTACCAG CTTAATCCAA
TCACTAAACC AGAAACGCTT CTCTGATACG GTTTCTGAAC AAATATCTGC AGACGATTTG
GGCGGACTTC CCGATGTGTC GATGGCGGAT GCACTGACCC GCTTGCCGGG TATCTCTGCA
GTAAGAACCG GAGGGCAAGC CGCGCAGATA AACATTCGTG GTCTATCCGG TGACTTTGTG
TTTTCTACAT TAAACGGTAG AGAGCAGGTA TCGACCAGCG GGAGTCGCGC CATTGAATTT
GACCAATATC CGTCTGAGCT AATCAGTGAA GCAGCGGTTT ACAAGTCGCC AAAGGCATCG
CTTATTGAAG GCGGCATCGC CGGTACGGTA GAGCTCAAAA CTGCTTCGCC CCTTGCCATT
GAAGAGCAGC ATAAATTCAG CGCCAACATG CGTGGCATGT ACAATGACAG GGCATCGGAG
ATAAGCGATG CCACAGAATA CGGCCACAGA CTGAGCTTTT CATATCAAGG CAAGTTTTTA
GACGATACGC TAGGTGTGTC ATTGGGCTAT GCCCGTTTAT TCCAGCCTAG CGTTTCTACG
CAATTCATCG GCTTAGCCTA TAACGGCCAA GTTGATGTTG ATGGTCTTGA AGGGGATGCA
GACGGCCCAG CAGAGTGCCC AAATTGTGAA CTCATTTCAG AAGGCTTTGA AATGCAGCAT
AAAGGTGGGG AAGAGACCCG TGATGGTTAT GTTGCCGCGT TTGAGTGGGC ACCTATCGAT
ACCTTTACAT TAAAAGCTGA TGCCTTCATT TCTAAGTTTG ACTCAGAAGC GTTTGCCCGC
GGTTTTCGTG TAAAACTAGG GGGAATTAAT GCGGGTATTA CCAACCCGGT TGTGGTGAAC
AATAATGTCG TTGGCGGGAC CTTCTCACGC ACAGATAACA GCTTTACCCG CGTTGAACTT
GTTAACGACG ACAATCAAGA TTTTGACAGT GTTACCAACT TGGGCGTTAA CGCGGCTTGG
GAAATCTCTC CGGACTTATC CGTACAGTTT GACGTATCCC GTTCAAGCGC AGAAAGTGAC
TTTAGAAACG GCTTATTATG GTCGCTTGTC GGTGATGACG CCACAGCAGC AAACCCAGCT
TTTGACGAAA ACGTACAAAT ATCCTATTTG CTAAACGGAT TAAATCTGCC TGATATTGGC
TTTAACCAAA CTGATGCCTT TACTGATTTA GACCGAGTCA TGGTGAGTAA GTACGGTATC
TATCCGTTTG AAAATAAAGA TGAGCTAGAT GCCTATCGTG TTGATTTTCA GTATTACGTC
GACGTGCCTA TCATTTCTGG CTTTGAATTT GGCTATCGCT ATTCAGACCG TGAATATAAC
AATGATCGCT CGGTGTTTGA ATACGGCAAT GACAGTGCAT TTTCAGTCAG CGAACCGCCA
CTTCGTTTAA CGTCGGATAT GGTCGAGCAA GTTGACTGGA GCGGTGATTT TGGTTATTTC
CCAAGTTATC TTTCTGTCGA CCTAAACAGT GCACTAAACG CATGGTTTCC TGGCGGTCGA
CCAGAGCCTG TTCAAACATG GGGGCCTGGT GCGGCAGGCG TTATTAATGG CCCCGGTACT
GGACCTGCTA CAGCATGGAC GCTACAAGAG AGTGGTGATG TATTTGAGAC GGTGAACTCT
GCTTATTTAA TGGCAAACAT TAATACAGAA ATTGGCAGTA TTCCTGTTAC AGGTAATGTT
GGTGTTCGTT ACGTTAAAAG TAAACAAAGT TCAACGACGC TACAGCGTGC GACTCAGTTA
ATTGAAGACC TAGAGACCGG AACATCGGTT GAAGTTAGTG ACCCTACGGC TGGTGCACAA
AACATTACCG ACGACGTAGG GTTAATTAAT AACTTTTATC GCCCAGCGTT GATAAGTCAC
GAATATTCTG ACGTTTTGCC TTCAATTAAC CTGAACTTTA AACTTACTGA TGATACTCAG
CTTCGTGTGG CAGCCGCGAA GGTGATGGGC AGGGCGCCTA TCAACCGTTT CGCTGCGAAT
GCATCTACTA CTATTGAAAC GGTTACCGCT TTCCAAGACA GAGACTCTGG TGAGATTACC
TTGTCTAATC CTACCGCAAG AGTTAGTGGG AATGCGCGAA ACAGCCCGTA CTTAGAACCT
TTCTACGCTA CCCAGTACGA CGTGTCGTGG GAATACTATT TCTCAGATAC GGAAGGTGCA
TTAGTTATCG CTGGCTTCTA TAAAGATATT GAATCGTTTG TTGAAGACAT TGAAATAGAG
CCTTATGACT TCGAAGCTAA CGGCATTGTT ATTCCTGATA ACGTAAGTGT ACCCGTTTAC
CTGACACCAG AGTTTAGCGG TCAGGAGGCT GAGCTTGCAC GGGATGAAAA CGGCGACCCT
ATCTTTGTGA CTGTTCCTAC CGAAAATGGC AGTTACAGCA CCGCAGTTAA TAATGCAGAA
GGTGGCTATA TCAGGGGGCT GGAGGTCGCT TATACCCAAA TATATAGCAT GCTTCCAGGC
ATGTTGTCTG GGCTGGGCGT AAGCGCAAGC TACTCCTACA CCGAAAGTGA AATTCAGCGC
ACCCTTGGCG ATGGTGTATA CGCTGCTAAC TTACCAGGCC TGTCTGAAAA CGTAGCTACG
CTAACCGTTT TTTGGGAGTA CGAAGGCTTT GAAACCCGCT TATCAAGTCG TTATCGCGAT
GCCTTTGTCT CGCAACAAGT TGCTGTTAAT GATCAGGTGG TTAACTTTGA CGATGAATTA
GTGATTGACT ACCAAGCGTC ATACGAAATT AGCGAAAATT GGAGTGTATT GTTTCAGGTT
AATAACCTCA CTGACGAACC AACGAAGAGC TATTTCGCGT CAGAAGAGCA AACCGGCACT
ATTCAGTACT TTGGCACGCA ATATTACCTA GGGATGACAT ATCAACTATG A
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| Protein sequence | MKTFKPSTIM AALISSGVAF SAAPLYAQES PDTSIDEVER PQEDTLERIE VRGFSTSLIQ
SLNQKRFSDT VSEQISADDL GGLPDVSMAD ALTRLPGISA VRTGGQAAQI NIRGLSGDFV
FSTLNGREQV STSGSRAIEF DQYPSELISE AAVYKSPKAS LIEGGIAGTV ELKTASPLAI
EEQHKFSANM RGMYNDRASE ISDATEYGHR LSFSYQGKFL DDTLGVSLGY ARLFQPSVST
QFIGLAYNGQ VDVDGLEGDA DGPAECPNCE LISEGFEMQH KGGEETRDGY VAAFEWAPID
TFTLKADAFI SKFDSEAFAR GFRVKLGGIN AGITNPVVVN NNVVGGTFSR TDNSFTRVEL
VNDDNQDFDS VTNLGVNAAW EISPDLSVQF DVSRSSAESD FRNGLLWSLV GDDATAANPA
FDENVQISYL LNGLNLPDIG FNQTDAFTDL DRVMVSKYGI YPFENKDELD AYRVDFQYYV
DVPIISGFEF GYRYSDREYN NDRSVFEYGN DSAFSVSEPP LRLTSDMVEQ VDWSGDFGYF
PSYLSVDLNS ALNAWFPGGR PEPVQTWGPG AAGVINGPGT GPATAWTLQE SGDVFETVNS
AYLMANINTE IGSIPVTGNV GVRYVKSKQS STTLQRATQL IEDLETGTSV EVSDPTAGAQ
NITDDVGLIN NFYRPALISH EYSDVLPSIN LNFKLTDDTQ LRVAAAKVMG RAPINRFAAN
ASTTIETVTA FQDRDSGEIT LSNPTARVSG NARNSPYLEP FYATQYDVSW EYYFSDTEGA
LVIAGFYKDI ESFVEDIEIE PYDFEANGIV IPDNVSVPVY LTPEFSGQEA ELARDENGDP
IFVTVPTENG SYSTAVNNAE GGYIRGLEVA YTQIYSMLPG MLSGLGVSAS YSYTESEIQR
TLGDGVYAAN LPGLSENVAT LTVFWEYEGF ETRLSSRYRD AFVSQQVAVN DQVVNFDDEL
VIDYQASYEI SENWSVLFQV NNLTDEPTKS YFASEEQTGT IQYFGTQYYL GMTYQL
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