Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01880 |
Symbol | |
ID | 6775753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2014886 |
End bp | 2016406 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642755316 |
Product | putative tryptophan halogenase |
Protein accession | YP_002126178 |
Protein GI | 196156689 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.198232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAGATC CTCATAATAA ACCGATAAAG CGTGTAGTGA TTGCCGGCGG TGGAACGGCA GGTTGGCTAG CTGCATCATT AATGAAAAAG GTGTTGGGTA AAGCAGTTGA TATTACTCTG GTTGAATCTG AAGCGATTGG TACGGTCGGT GTTGGCGAAG CTACCATCCC CCCAATACGC CTAGTAAACC AAGTGTTAGG TATCGACGAA GCACAGTTTC TTCATGATAC TAAAGCAACG ATAAAACTTG CTATACGGTT CGAAAATTGG AAAACGAAGG GTGAAAGCTA CTATCACACC TTTGGTGCGC CGGGCAAAAG CATGGCGTTT TGTCATTTTC ATCACTATTG GGTAAAGGCG CGCCAGCAAG GCCTAAAAGC CGACCTGTGG GATTTTGACC TAAATTACCA TGCCGCTGAA GCGGGACGAT TTGCGCAGAT TAATGCCAAA GACCCAGTCG TTGAGCTACC TTTCGCCTAT CATTTTGACG CCAGTTTATA CGCTCAGTAT TTACGAAAGC TGAGTGAAAA TATGGGGGTT GTACGCAAAG AAGGTAAAAT TTCACGTGTT CAACGTTTTA CCGACAGCGG TTTTATTCAA GCACTTCACT TAGAAAGTGG GGACGTGGTT GAAGGGGACT TATTTGTTGA TTGCACGGGC TTTAAGGGGC TATTGATAGA GGAAGCGCTG GGCGCTGGTT ACGACGATTG GTCTCACTTA CTTCCTTGTG ATAGTGCCAT TGCTGTACCG TCTGAGCGAC ATGAAAAAAC CGCGCCTTAC ACGCGCTCTA TTGCCCACGA TGCGGGTTGG CAATGGAGGA TCCCACTGCA ACACAGAAAT GGTAATGGCC ACGTATATAG TTCACGCTAT ATCAGTGATG ATCAGGCCTG TGACACCTTG TTGTCAAACT TAGATACCAA ACCATTGGGC GACCCTAAAC TGATAAAGTT TACGACGGGC AGACGACGTA AGCAATGGTA CAAAAACGTA GTAGCAGTAG GTTTATCAAG TGGATTCTTA GAGCCACTTG AATCTACCAG TATTCACCTC ATTCAATCTG CAATTGTTCG CTTAATTCAG TTGTTTCCCC ACAACGGTTT TGCTCCAAGC TTGGAATCGG AATATAACAA GCAGTCTGAA TTAGAATTTG AACAAATCCG AGATTTTCTT GTTTTGCATT ACACCGTAAA TGAGCGAACC GATAGCGCCT TTTTCAATGA TATGCGAAAT ATTACTTTAC CCGATTCCCT TGCACATAAA ATTGCGTTGT TTAAAGAAAG CGGAAATCTG CTACGAGAAC AAAATGATCT ATTCCTTGAA AGCTCATGGC TACAGGTCTT GTACGGTCAG GGGATTACTC CTAAGGATTA TCACGGTCTG GTAAACAGTG TGCCTGAAGT TCAGTTAAAT CAAATGTTAA CAAGGTTGTT GGAAATCAAA AAAGAGCCCA TTGCTAAGTT GCCGACACAT GACGAATATA TAAATGGGAT GGTTGCAAAG TATAAGCGCG CAATGAGTTG A
|
Protein sequence | MQDPHNKPIK RVVIAGGGTA GWLAASLMKK VLGKAVDITL VESEAIGTVG VGEATIPPIR LVNQVLGIDE AQFLHDTKAT IKLAIRFENW KTKGESYYHT FGAPGKSMAF CHFHHYWVKA RQQGLKADLW DFDLNYHAAE AGRFAQINAK DPVVELPFAY HFDASLYAQY LRKLSENMGV VRKEGKISRV QRFTDSGFIQ ALHLESGDVV EGDLFVDCTG FKGLLIEEAL GAGYDDWSHL LPCDSAIAVP SERHEKTAPY TRSIAHDAGW QWRIPLQHRN GNGHVYSSRY ISDDQACDTL LSNLDTKPLG DPKLIKFTTG RRRKQWYKNV VAVGLSSGFL EPLESTSIHL IQSAIVRLIQ LFPHNGFAPS LESEYNKQSE LEFEQIRDFL VLHYTVNERT DSAFFNDMRN ITLPDSLAHK IALFKESGNL LREQNDLFLE SSWLQVLYGQ GITPKDYHGL VNSVPEVQLN QMLTRLLEIK KEPIAKLPTH DEYINGMVAK YKRAMS
|
| |