Gene MADE_01828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01828 
Symbol 
ID6776009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp1961195 
End bp1962295 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content44% 
IMG OID642755264 
Productbeta-lactamase precursor 
Protein accessionYP_002126126 
Protein GI196156637 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.284204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGTC TAGCCATTTT TATATTTGCT TTAGCACTTT CAAGTTGTAG TGCGGGTTCT 
GACCATCGTA ATGTATCTTC ACTTATTCAG TCAGATAAAG CCTCAATGGC TAGTTTGGCT 
TATGAACTTC AGCACGAACA TAATGCCGGG ACTTTTGATG GGCTTGTTCT GGTTGCTCAA 
AAGGACGTTG TTTTATTCAA GAGTGCCTAT GGCTATGCTG ACAGGGAAGA TTCTGTAAGA 
AATAGCTCTG CAGCAATCAT TGATATGGGG TCAATTGCAA AAACATTTAC CGCAGCGGCC 
GTGCTACAAC TTGCCCAGAA AGAAAAACTA CAGCTTTCTG ACAAGATTGG AGATTTTTAT 
CCAACGGCCC CTGATGAAAT AAAGCCTATA ACAATTGCGC AGCTTTTAGG GCATTCAAGC 
GGATTGGATA ATTTCCATAA TGAGTCTGAC TTTGAGTTGA TGGATAAAGC TCAGGCTGAA 
CGCAGAATCT TAGAAATGCC GTTAATTGCA AAGCCGGGTG AGAAAATCGC ATATTCCAAC 
GCGGCTTATA CGTTGTTGGC GGCTATCGTC GAGAAAGTGA GCGATAAACC TTTTCAAGAT 
TACGTCCACG ATAATTTATT GACCCCGTTA AACTTGAAGA GCACCGGTTT CTACCAAGAT 
CAACGAGTAT CATTAAATAA CCTAGCTCGT GGCTACGGAG GAGATGACCA AGGCCGTACC 
ACTTTTGAAA AAGGCTTAAC CTGGGCGCTA ATTGGTGCTG GTGGTATGGT TACGTCAATT 
GATGATTTAG CTATTTGGTC TGCTGCACTT AAAAACGGAG CCATGTTCCC CGCAGGGGCG 
TCAAACTTAG CTTTTTCTAA AGCAAATGCA CGGTGGTTGC TGGGGAGTTT AGCGCAGGTC 
GAAATTAGTG GTGAATCCAT CATTCAGATG GGAGGCAGCA CTGACTATGG CTACACCGCT 
CTGATTCAGT TTGTTCCACT AAACAAGACA GGCATGTTTG CGGTACTTTG GGTTGGGGAG 
TCCAATTATC TCACTGGGAC GCTAACACAT GGGCTGCGTC ACTTCGTTCC TAATTTTAGC 
CCATGTATTC TCGCCCCTTA G
 
Protein sequence
MNRLAIFIFA LALSSCSAGS DHRNVSSLIQ SDKASMASLA YELQHEHNAG TFDGLVLVAQ 
KDVVLFKSAY GYADREDSVR NSSAAIIDMG SIAKTFTAAA VLQLAQKEKL QLSDKIGDFY 
PTAPDEIKPI TIAQLLGHSS GLDNFHNESD FELMDKAQAE RRILEMPLIA KPGEKIAYSN 
AAYTLLAAIV EKVSDKPFQD YVHDNLLTPL NLKSTGFYQD QRVSLNNLAR GYGGDDQGRT 
TFEKGLTWAL IGAGGMVTSI DDLAIWSAAL KNGAMFPAGA SNLAFSKANA RWLLGSLAQV 
EISGESIIQM GGSTDYGYTA LIQFVPLNKT GMFAVLWVGE SNYLTGTLTH GLRHFVPNFS 
PCILAP