Gene MADE_01716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01716 
Symbol 
ID6776217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1841266 
End bp1841571 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content38% 
IMG OID642755149 
Productputative anti-sigma factor antagonist 
Protein accessionYP_002126014 
Protein GI196156525 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATAA GGTCGAGCTA TCAAAATCAG GGACAAACCT TGGTTATTGA TGTGGGAACA 
AAATTTGATT TCAGCAAAGT AGAAGACTTC AGAAACGCCT ACGATAAACT TGACGATGAT
GTTGCACATA TCGCCGTGGA TCTATCGCAA ACCGAATATA TGGACAGTTC TGCATTAGGC
ATGCTGCTTA ATATGCAAAA ATCGTTAGCC AACAAGGAAT TGTCATACAG TATCGAAAAC
GCCCGTCCTC AGGTTGCGAA AATTTTAAAA ATATCTCGTT TCGATAAGAA ATTTGACATC
AAGTAA
 
Protein sequence
MEIRSSYQNQ GQTLVIDVGT KFDFSKVEDF RNAYDKLDDD VAHIAVDLSQ TEYMDSSALG 
MLLNMQKSLA NKELSYSIEN ARPQVAKILK ISRFDKKFDI K