Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01716 |
Symbol | |
ID | 6776217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1841266 |
End bp | 1841571 |
Gene Length | 306 bp |
Protein Length | 101 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642755149 |
Product | putative anti-sigma factor antagonist |
Protein accession | YP_002126014 |
Protein GI | 196156525 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATAA GGTCGAGCTA TCAAAATCAG GGACAAACCT TGGTTATTGA TGTGGGAACA AAATTTGATT TCAGCAAAGT AGAAGACTTC AGAAACGCCT ACGATAAACT TGACGATGAT GTTGCACATA TCGCCGTGGA TCTATCGCAA ACCGAATATA TGGACAGTTC TGCATTAGGC ATGCTGCTTA ATATGCAAAA ATCGTTAGCC AACAAGGAAT TGTCATACAG TATCGAAAAC GCCCGTCCTC AGGTTGCGAA AATTTTAAAA ATATCTCGTT TCGATAAGAA ATTTGACATC AAGTAA
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Protein sequence | MEIRSSYQNQ GQTLVIDVGT KFDFSKVEDF RNAYDKLDDD VAHIAVDLSQ TEYMDSSALG MLLNMQKSLA NKELSYSIEN ARPQVAKILK ISRFDKKFDI K
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