Gene MADE_01714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01714 
Symbol 
ID6775574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1839901 
End bp1840530 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content45% 
IMG OID642755147 
Productchemotaxis protein CheY/response regulator receiver domain protein 
Protein accessionYP_002126012 
Protein GI196156523 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCA TGTACTACGA GGATGGAACC GCTTTAGAAC TGCTAAAATT CATAAAAGAA 
GATGAAGCGT TTAAAAGTAT TCCTTTCATG CTTGTGTCCA GTGAAAATAG ACTCAGCAAA
TTAGAAGAGT TTAAACAGGC AGGAGTGGCG GCCATTCTAC CTAAACCCTT CGAACCTCTC
CATCTGTCTC GCGCGCTTAA TGCAAGCTTA GATTTAATTA ATCACGACGA ACTTGAGCTG
GATTTATTCG ACGTTCACGA CGTCCGCGTA TTGCTTGTTG ATGACAGTAA GTTGGCAAGA
AATCATATAC GTCGAGTTCT TGAAGGCATG GGGCTACAGC GTATTCGAGA AGCTGAAAAT
GGTGCCGCTG CACTTACGCT CATTAAAGAC GAGCCTTTTG ACTTAGTAGT TACCGATTAC
AACATGCCCG AAATGGACGG CCGCGAGCTG TCTGAGTTTA TACGCTTTAA CCCCGAGACC
ACCCATATCC CTATTATTAT GGTGACCTCA GAGGCAGCTG ATAGTGCGCA TATGGCAAAT
ATCCAGCAGA CCGGTGTTAA TGCACTATGT GACAAGCCAT TTGAGCCAAA TGAAGTAAGA
CAAATGCTAT CTGCCCTACT CGGGAATTAA
 
Protein sequence
MSAMYYEDGT ALELLKFIKE DEAFKSIPFM LVSSENRLSK LEEFKQAGVA AILPKPFEPL 
HLSRALNASL DLINHDELEL DLFDVHDVRV LLVDDSKLAR NHIRRVLEGM GLQRIREAEN
GAAALTLIKD EPFDLVVTDY NMPEMDGREL SEFIRFNPET THIPIIMVTS EAADSAHMAN
IQQTGVNALC DKPFEPNEVR QMLSALLGN