Gene MADE_01709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01709 
Symbol 
ID6775608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp1834251 
End bp1834901 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content44% 
IMG OID642755142 
Producthypothetical protein 
Protein accessionYP_002126007 
Protein GI196156518 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0180886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCCG AATATTTTAT CGTGCTAGGC ATTATCGGTG TTGCCTTCTT CGCTATATCA 
GGCGCACTGT TGGGACACGA AAAGAATATT AATGGTTTCG GTATAGTGGT TGTTGGCGTA 
ATGACGGCAT TAGGCGGCGG AACCTTAAGG GACCTATTGT TAGGTAAACC TATTTTCTGG 
GTAGATAGTT CTGAATACCT TTTAGCAACC TACAGCGCAA TATTTGTTAC CGTATTATTC 
ATACGCTACT TCCCATCACC TTCAAATTTT TATTTCATCT TGATTGATAC AGTAGGGCTT 
GCCATATTCA ACGTGATAGG CATAGAAAAG GCATTGATTA GCGGAACAGG AATGATTGTC 
GCATTAACCA TGGGGATGAC GACAGGCATC TTTGGCGGTT TGATGAGGGA CGTTGTTTGC 
CGAGAGGTTC CCTATGTTAT GCGTGGTGAT GTTTATGCCA GCGCTTGCTT CGCCGGGGGT 
CTTACTTATG CTGCGCTATT TGCGCTCGAT ATACCTTACA TATGGTGTAT TTTAGGCTCT 
ATTGGCGTTA CGGTGCTATT GCGGATTGCA TCACTTCACT GGGGCGTCAA TGTTGACCTG 
TTCAGAAAGC GAACGCCTAG ACAACAGAAA AAAGAGAGTA GCACTGAATA G
 
Protein sequence
MTSEYFIVLG IIGVAFFAIS GALLGHEKNI NGFGIVVVGV MTALGGGTLR DLLLGKPIFW 
VDSSEYLLAT YSAIFVTVLF IRYFPSPSNF YFILIDTVGL AIFNVIGIEK ALISGTGMIV 
ALTMGMTTGI FGGLMRDVVC REVPYVMRGD VYASACFAGG LTYAALFALD IPYIWCILGS 
IGVTVLLRIA SLHWGVNVDL FRKRTPRQQK KESSTE