| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01572 |
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| Symbol | |
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| ID | 6775219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1683066 |
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| End bp | 1685126 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642755004 |
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| Product | TonB-dependent receptor, putative |
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| Protein accession | YP_002125870 |
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| Protein GI | 196156381 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAATA TAACTCTAGT AAAAACACTT ATAGCAAGTT CAATTGCATT TAGCATTTCC
CCTGCATTGG CACTAGATGA CCCAGAGGGA GATATCGAGC ACATCAGAGT GCGTGGTGAT
GCTTCCATTA AGGACGGCGA GTTTATCTCC GCTTCACAGG GATGGGTTTC AGGCGATACG
CTTATCGAGC GGCCAATGCT TCGCGCTGGT GAGATACTTG AGTTTATACC CGGCATGATG
GTGACTCAGC ACAGCGGTTC GGGAAAGGCC AATCAGTATT TCCTTCGCGG GTTTAATCTC
GATCACGGAA CCGACTTTAC CGTAAGCGTA GACGGTATGC CTGTGAATAT GCGAAGCCAC
GGTCACGGGC AGGGTTATAG CGACCTAAAC TTCATCATTC CAGAATTTAT AGACAACCTT
AGCTACTTTA AAGGCACGTA TTACGCCAAC ATTGGTGACT TTTCCAGCGC TGGCGGGGCG
TTCTTCAACT TGCGAGACGC TCTTGAACAG AACCAGCTCT TTTTAGGCTT AGGTGAATAT
GGGTTCAAGC GCGCCGTTGC TTTGAATCAG TTTAACGCTG GTGAGAGTCG CGTTGTTACT
GCTCTAGAGT ATCAAACCTA TGACGGCCCA TGGACTGACG TTGACGAAGA TGTAAAAAAG
AAGAACGCAC ATATCCGTTA TATTACGCCC TTGCTAGACG GCCAACTCAC AGTAACAGGC
ATGGCTTACG ACAACAGCTG GAATGGCGCT GATCAAGTTC CTGAGCGCGC TATTCAAAGC
GGCTTAATAG ACCGGCTTGG CTCTATCGAC ACTCAAGTGG GCGGTGAATC CTCTCGCTAT
AGTTTATCTG CAAACTATAC CAGCGACACG TGGAACGCCT CGTTTTATGC TATCGATACC
GACCTCAGCC TTTTTTCAAA CTTCACTTAC TTTTTAGATA ACCCTGCTCT AGGCGATCAA
TTTGAGCAAG CTGACGACAG ACAAATTTAT GGTGGCGAAC TATTTACCAC CCTCCCCCTC
GCTATTACCG AAGGCAGTAG CCTGACATTA GGCGGCCAGT GGCGTTTTGA TGATATTGAT
AACGTAGGCT TGTACCGCAC GCAAAACCTT CAGCGTTTTG GCACGATTCG AGAAGATGCC
ATAGAAAGCA ACAGCTATGC GTTATTTGCT CAGTCAAACA TTGTATTAAG TGATGCACTT
AGTCTGTCAT TAGGTGGTCG TTATGATTAC TTAGATGTAA ACGTCAATAG CGATGTAAAC
GCAAACAGCG GTAGTGCTGA CGATGGTATT TTTACGTTAA AAGCAGGCCT GAAATACTTG
TTGTCTGAAC AGCTCACCGC GTTTGCCAAT ATCGGTCAGG GCTACCACTC AAACGACGCT
CGGGGTGCAA CCATCAGCGT AGATCCGGTA AGTGGGGATG CAACCGAACC TTCACCGCTA
TTAGTAAAGT CTCTTGGTTA TGAAGCCGGA GTCAATTTTA CCGATAACAA AACTTATAAC
GTATCAGCTG CATTGTGGCG ACTAGAACTA GACAGTGAGC TGGTTTACGT CGGCGACGCA
GGTTTTACCG AGGCGAGCCG CCCATCGGAA AGACACGGCA TTGAAGTAAG TGCCTACTAT
TGGATTAGTC ACCATGTTAC AACTGATATT GAAGCCGCAT GGACAAAAGC GAGGTTTAGC
GACAGCGTAG AAGGCGAAGG CCGCCATATT GACGGTACAG TTCCGGGCGT TGTGAGCGCG
GGCCTGACGT ATTTTCAAAA CAGCAACCAG CTTGGGTTTA GCTATACGCT GCGAGGTCGT
TATTTAAGTT CTCGCACCGT TGAAAGCTTC GATAAAATTT CACCGCCATC AACGTTTTTA
ATGAATGCAC AGGTCGCTTA TCGTCAGCCT GAGTGGGACC TAACTTTAGA AGTGCTGAAT
GCCTTAGACA GTGACGACCA TGACATCGAC TACTTTTACG CATCAAGGCT GCCGGGCGAG
CCAGACGAAG GCGTGGAAGA TTTGCATTAC CACCCTGTCG AACCAAGAAA TGTTCGACTT
ACTTTTACCC TGAAATACTA A
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| Protein sequence | MTNITLVKTL IASSIAFSIS PALALDDPEG DIEHIRVRGD ASIKDGEFIS ASQGWVSGDT
LIERPMLRAG EILEFIPGMM VTQHSGSGKA NQYFLRGFNL DHGTDFTVSV DGMPVNMRSH
GHGQGYSDLN FIIPEFIDNL SYFKGTYYAN IGDFSSAGGA FFNLRDALEQ NQLFLGLGEY
GFKRAVALNQ FNAGESRVVT ALEYQTYDGP WTDVDEDVKK KNAHIRYITP LLDGQLTVTG
MAYDNSWNGA DQVPERAIQS GLIDRLGSID TQVGGESSRY SLSANYTSDT WNASFYAIDT
DLSLFSNFTY FLDNPALGDQ FEQADDRQIY GGELFTTLPL AITEGSSLTL GGQWRFDDID
NVGLYRTQNL QRFGTIREDA IESNSYALFA QSNIVLSDAL SLSLGGRYDY LDVNVNSDVN
ANSGSADDGI FTLKAGLKYL LSEQLTAFAN IGQGYHSNDA RGATISVDPV SGDATEPSPL
LVKSLGYEAG VNFTDNKTYN VSAALWRLEL DSELVYVGDA GFTEASRPSE RHGIEVSAYY
WISHHVTTDI EAAWTKARFS DSVEGEGRHI DGTVPGVVSA GLTYFQNSNQ LGFSYTLRGR
YLSSRTVESF DKISPPSTFL MNAQVAYRQP EWDLTLEVLN ALDSDDHDID YFYASRLPGE
PDEGVEDLHY HPVEPRNVRL TFTLKY
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