| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01555 |
|---|
| Symbol | |
|---|
| ID | 6775208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 1669535 |
|---|
| End bp | 1670425 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642754986 |
|---|
| Product | transport protein |
|---|
| Protein accession | YP_002125853 |
|---|
| Protein GI | 196156364 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTTACTG TAGAACTTGC TGAGCCGGCA GAGCGTTGGA TGCATTCTCT GCCAAAAATA
GCCGCCGAAA TTAGCGAAGA AATAGAAGAA ATTAGCAGTA GTATTGATGC CTATACTACA
CCTCCTGCAG CTGAACCAGT TGAAGAGGAA CCCTCTATTT TCAACTGGTT TGGCGACGAC
GATTCCCCAA AGCTGCCCGT AGCTCAACCT GATACCTCAA ATTCGGTTAC CGACAAGATT
AAACAAAGCG GTATTAATAT GGGAATAACC TTGTTTAGCA ACGCGCCATT CTTATTAGCT
CAAGTCATGG CATGTGTTGT GTTGATTTTT TTCTTATTGG TTTTTGGCCC TAATCTGTTT
CACGTTTTCA TCAGAGATTT CCCGGTGGTT ACCGACAAAA GACGAGCACT GGTATTAGTC
GATCAAATTC AGCGAGAACT TTCTGCATAT ATAGTCACAA TCAGTATCAT AAACACCTGT
TTAGGGCTGG CTACAGCTGG TGCATTTTAC TATTTGAATA TTGAAGACGC GCTTTTGTGG
GGCGCCCTTG TTGCTTTAAT GAATTTTGTT CCCTACCTGG GCGGTATCGC AAGTAGCATG
GTGTTGCTAG TAGTAGGAGT TGTTCAGTTT GGACTTACCA GCAGCGCATT TCTTCCAGCC
GGTGTCTTTT TGTTTTTAAA TATTATTGAG TCTCAGTTGA TTACCCCAGC CGTATTGGGG
CGCAGTATGC AGCTCAACCC GCTAATAATA ATTATTTGGA TAGCTATTAC AGGCTGGCTG
TGGGGCGTGG TGGGCGTCTT ACTCGCAGTG CCAATATTAA TGTGCGTTAA AATTATTTTG
GAAAATCTAG GCGTTTTTGA CCACTGGATA AGGCTTCTTG AGTCGAAGTA A
|
|---|
| Protein sequence | MLTVELAEPA ERWMHSLPKI AAEISEEIEE ISSSIDAYTT PPAAEPVEEE PSIFNWFGDD
DSPKLPVAQP DTSNSVTDKI KQSGINMGIT LFSNAPFLLA QVMACVVLIF FLLVFGPNLF
HVFIRDFPVV TDKRRALVLV DQIQRELSAY IVTISIINTC LGLATAGAFY YLNIEDALLW
GALVALMNFV PYLGGIASSM VLLVVGVVQF GLTSSAFLPA GVFLFLNIIE SQLITPAVLG
RSMQLNPLII IIWIAITGWL WGVVGVLLAV PILMCVKIIL ENLGVFDHWI RLLESK
|
|---|
| |