| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01528 |
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| Symbol | |
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| ID | 6775298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1639378 |
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| End bp | 1641540 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642754961 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002125828 |
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| Protein GI | 196156339 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACAA ACCCTGCTGA AGACTCGTTA AACCTTCTTA TGCTTAACTC TAAAATACCG
TTTTTGTTTT CGTTAGTTGG ACTATCGGTG AATGCCGCTG CGCAAAGTAG TAAAAGTTCC
CTTCAAGATG CTCACGATGA ATTAGAGCAC ATCGAAGTAA AAAGACACTT TCAGCCTTAT
CGTGGTAACG TACCGCTTAT CGACACGCCG CAAGCAATTG ACCGAATTAC CGCCGATACA
TTAGCAAATG AAGGGATCAC ACGCTTCATC GATGCACTGG ATTTTGCGCC GACTATCGTA
AGGCAAAACA ACTCGGGCGG TATGTTCGAT AGCTTTGCTA TTCGTGGCTT TTCTGGCGAT
GAAAACAATC CGTCGGGGTA TCTGATAAAC GGCTTTAACG TACGTGGCTA CAGCGGCAAT
AGAAGTACGG TTAACGTTCA AACTATTGAA GTAATGAAAG GGCCAGGCTC TGCCCTTTAT
GGGCAAGGCG AGCCTGGCGG TACCATCAAC ATCATCACCA AAAAACCGCA GTTTGAAGAG
CAAGGCTACG TTCAAGCCAC CGTCGGTAAT TTTGATAAGA AGCACGTAGA GTTCGATTAT
ACGAACGGCA TTAGTTCAGA TATGGCGTAT CGCATTAACG GTTCGTACGA AGACTCTGAT
ACTTATCGCG ATAACGTGTT TTTCAAGAAT TTAAACCTTA ACCCTTCATT TATTTGGAAC
CTCTCTGGTC ACACCAGCTT AAGTTATCAG ATGGAAATCT TAGATCAGGA AAAGCCGCTT
GATCGCGGTG TATTTATCTT AAATAACGAC TTTGACGCTG TAGATGCCGA AGACTTTTAC
GGTGATATCA GAGACAGTGC CCATGAAGTT AAAGCCTTTG GACATCAGCT AGTGTTAAAT
CACGAGTTGA ATCACAATTG GCATTTTCTT AGTGGCTTCG CCTACAGAGA CTCTTCTTTT
GAAGGGCAGT CTTCAGATAC TGAACTGTCA GATGGTCGTC AGCTTTTGTA TACCGACCCA
TCTGTACTTT CAAGGCAGCG ACGAACCCGC GACTATCAAG CGCAAGACTT ATCGCTACGC
TTTGAATTAA GTGGCGTGGT GGATGTGGCA GGCTTTGTAA ACAACGTCTT ATTTGGTTTG
GACTACTACA ACTACCACAT AGATACAGAC TATCGTCGTT GGCGCACGGC GTGGGGCGCG
GGTGATACCA CGTATAGTAT CGACCCTGAA AACCCAGACT ACACTATTTT CAGACCTGAC
GTGACGCCCA CTACACTCAC CGCCGAAAAG CAAAAAGGGT TAGGATTTTA TGCACAAGAC
GTTATAGAAC TTACCGATGC CACCAAGCTT TTAGTCGGCT TTCGTGTGGA CAAGTTCGAG
CAAGACATTT TTAATAAGCT GAGCGAAGAA GGGCAAGAAC AAGACCAAAC GGAAGTGACG
CCACGCTTCG GTTTTGTGTA TGAAATCAAT CACGCTGTAA GTCTATACAC GAGCTATGCA
GAAGGTTTCA GACCCAATCC AGGGCTTGAT TCAGACCGCA ACGCCTTTGA CCCTGAAGAG
ACCACCTCTT TTGAGGTAGG TGCGAAGTGG GAAAACATCG CCGATAGGTT CTCAGGCAGC
ATTGCGATTT TTGATGCAGC AAAGACCAAT ATGCTAACCG CTGAACCTAA CACGGGCTTT
TCAGCCACGC TCGGTGAAGT TGAAAGCCAA GGGGTTGAAT TTCAGTTAAC CACTGACCTT
ACTTCAGACA TTCGTCTTGA TATGGCCTAC GCATACATAG ATGCTAAAAC CGCGAATGAA
GTCAACAACT TGGATTGGGG GGTGTCTATT CCAAAGGGTT CACGCTTAAT CAATATTGCT
AAACATTCGG GGTATATCTC GCTTAACCAT TTCACCCGCG TATTTGAAAA AGAAGCGTTC
TTTGGTGTGA CCATGCGTTA CGTGGGTGAC CGCTTAGGCC AAACCACCGA TCCAACATTC
ATCTTGCCGT CTTACACCCT TGTGAACCTT GCAGGGTCGG TGAATATTAG CGATGCGCTC
TCTATGAGGT TTGACGTGAA CAATCTGTTC GACAGGGATT ACTTTGAGAA CTCATACCAC
CAGCTTTGGA CCATGCCCGG CTCACCGACT AACTATACGG TAAGCGTTAA GTACCAGTTC
TAG
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| Protein sequence | MFTNPAEDSL NLLMLNSKIP FLFSLVGLSV NAAAQSSKSS LQDAHDELEH IEVKRHFQPY
RGNVPLIDTP QAIDRITADT LANEGITRFI DALDFAPTIV RQNNSGGMFD SFAIRGFSGD
ENNPSGYLIN GFNVRGYSGN RSTVNVQTIE VMKGPGSALY GQGEPGGTIN IITKKPQFEE
QGYVQATVGN FDKKHVEFDY TNGISSDMAY RINGSYEDSD TYRDNVFFKN LNLNPSFIWN
LSGHTSLSYQ MEILDQEKPL DRGVFILNND FDAVDAEDFY GDIRDSAHEV KAFGHQLVLN
HELNHNWHFL SGFAYRDSSF EGQSSDTELS DGRQLLYTDP SVLSRQRRTR DYQAQDLSLR
FELSGVVDVA GFVNNVLFGL DYYNYHIDTD YRRWRTAWGA GDTTYSIDPE NPDYTIFRPD
VTPTTLTAEK QKGLGFYAQD VIELTDATKL LVGFRVDKFE QDIFNKLSEE GQEQDQTEVT
PRFGFVYEIN HAVSLYTSYA EGFRPNPGLD SDRNAFDPEE TTSFEVGAKW ENIADRFSGS
IAIFDAAKTN MLTAEPNTGF SATLGEVESQ GVEFQLTTDL TSDIRLDMAY AYIDAKTANE
VNNLDWGVSI PKGSRLINIA KHSGYISLNH FTRVFEKEAF FGVTMRYVGD RLGQTTDPTF
ILPSYTLVNL AGSVNISDAL SMRFDVNNLF DRDYFENSYH QLWTMPGSPT NYTVSVKYQF
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