| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01456 |
|---|
| Symbol | |
|---|
| ID | 6775891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 1562167 |
|---|
| End bp | 1562751 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642754894 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002125761 |
|---|
| Protein GI | 196156272 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCG TATTACCACT AGATGAAGAG CAAAGAGATG CGCTTCAGGA ATTGCTGAAT
ATTTCTATGG GGCAAGCGGC AAACTCGCTC GCTCAGTTAA TTGAAACCAA GATAGATATT
TCTATTCCCA AAATTTCGGC AGTCACCCCT ACACAACTGT ATGGACTATT GTTTGAAACT
GAAGGGGCTT TTTACACCCG CCAGTCGTTT TTAGGAGACG TTCACGGTGA AGTGATGTCC
GTACTCTCTC AGGCGGGTTT GACAGAAGTT GCCACCTTGA TGGATTACGA AGACCCATTA
AGTGAAGAGG ACATTCAGGA AATTATATTA GAACTGTGCA ACATCTTAGC GGGGGCTTGC
TTAGCGGGTC TTTCGGAACA ATTAGAGCTG ACGACTAACT TGAATATGCC TACCCTGTTT
CAACCCGATA AGAGCAATTT CGACGATTTA AAGTGGCAAC ATAGTTTAGT CATGGAAGTC
CAATTCGTTA TTGCTATCTC TTCGTTTAGC ATGCGCGTGG TTTTCTGCCT CGACGATGAA
TCGCTTGCTC GAATAAAAAA TACGCTGGAT GAGTTGCTCG CATAA
|
|---|
| Protein sequence | MSIVLPLDEE QRDALQELLN ISMGQAANSL AQLIETKIDI SIPKISAVTP TQLYGLLFET
EGAFYTRQSF LGDVHGEVMS VLSQAGLTEV ATLMDYEDPL SEEDIQEIIL ELCNILAGAC
LAGLSEQLEL TTNLNMPTLF QPDKSNFDDL KWQHSLVMEV QFVIAISSFS MRVVFCLDDE
SLARIKNTLD ELLA
|
|---|
| |