Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01416 |
Symbol | |
ID | 6779092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1515009 |
End bp | 1516586 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642754851 |
Product | transposase |
Protein accession | YP_002125721 |
Protein GI | 196156232 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.853931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAC GCTCTATTAG TCACCTTTCA CCGTCTGAAA TTGAGGCTGC CTTTGCTCAT CAAGCCGATG AAATTGCGCA ACTCAAGCAG CAACTCGACT GGCTTAAACG TCAGTTGTTC GGGCGTAAGT CTGAAAAGGT GTTAGCGGAT AATCCGGCGC AGAGCAGTTT GTTTGATGAG GGGGAAACCC TCACCTTACC GGCAGAAACA AAACCGGTGA AGGCACATAC TCGTTCCTCA CAAAAGCAAC GTCGCGACTC GGATTTGAAT GATGAAGGCC TGCGTTTTGA TGAGACAGTG CCGCAACAGA TTATTGATAT ACCTGCGCCA GAATTACAGG GGGCGGATGC CGACCAGTAT GAATTAGTGG ATACCAAAGA AACCTGTCGC TTAGCACAAC AGCCTGGCAG TTATGTGGTA TTGAGATTCC GTCGACAGGT CGTGCGTCAT AAAACCACGC AAACCATTAA GGAGACGCCT GCCCCCACCA ATGTGCTGGA AGGCTGTTAC TGCGATGTCT CACTGCTCGC CGGACTGATG GTTGATAAAG CGGTGTATCA CTTACCGCTT CACCGCCAAC ATCAACGGAT GCTGGATAGC GGTATTACCC TTAGCCGGGC CACCTTAATC AACTGGATAC AAAAAGGCAT TGAGCTGCTT CGACCCATCG CCAAAGCCCA GTGGCAACAC ATTCTGCAAA GTAAAATACT GGCCATGGAT GAAGTGCCCA TTAAAGCAGG TCGCACTAAA GGCGCTGGCC GAAAACCCGG ACACATGAAA CAAACCTACT TCTGGCCCCT GTACGGTGAC AGTGATGAAG TGGCGTTTAC TTGGAGTAAC AGCCGGGGTA TGTTGCATGC CCAAGCACAG TTACAGGACT TTACCGGTAC CTTGCTCACC GATGGCTATG CCGCTTACAC CAAAACGGTA GCGCAGATAA ACCAACAAGA ACAACAGATT GTGCACGCAG CCTGTTGGGT ACACATGCGC AGGGGCTTTG AAAAAGCCCT CGACAGTGAG CCGCAAGCCG CACAGCAGGC ACTGGATATT ATCGCTGCGC TCTACCGACA TGAAAAACAC ATCAGGCATA AACAATTAGA CCTAGCCGAT ATCCATGCTT ACCGGCAACA ACACAGCGAG CCACTCGTTA CCGACTTCTT CCGGTGGGTC TATCAACAGC GACAACGCAC TGATTTACTG CCCAAATCTC CCTTCGCCAA GGCACTCCAT TATGCGCATG AGCGAGAAAG CCAACTCAAA GTGTTCCTGG GTAACCCCGC CTTACCCATG GATACCAATC ATCTTGAGCG GGCACTGCGT GTTATTCCCA TGGGGAGAAA AAACTATTTG TTCTGCTGGT CTGAACTTGG CGCTGAACAA CTGGGCATAC TGCAAAGCCT GATGGTGACT TGCCGCCTGC AAGGCGTTAA TCCCTACCAT TATCTGGTGG ATGTATTACA ACGCGTGGCA TTACATCCGG CCAGGGACGT AATCGACCTC ACGCCGCGGC TCTGGAAACA AAAATACAAT CAAAACAGGT TAGTCAGCGA TGTCAAAATA CTCACTTCCC AACACTAA
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Protein sequence | MKTRSISHLS PSEIEAAFAH QADEIAQLKQ QLDWLKRQLF GRKSEKVLAD NPAQSSLFDE GETLTLPAET KPVKAHTRSS QKQRRDSDLN DEGLRFDETV PQQIIDIPAP ELQGADADQY ELVDTKETCR LAQQPGSYVV LRFRRQVVRH KTTQTIKETP APTNVLEGCY CDVSLLAGLM VDKAVYHLPL HRQHQRMLDS GITLSRATLI NWIQKGIELL RPIAKAQWQH ILQSKILAMD EVPIKAGRTK GAGRKPGHMK QTYFWPLYGD SDEVAFTWSN SRGMLHAQAQ LQDFTGTLLT DGYAAYTKTV AQINQQEQQI VHAACWVHMR RGFEKALDSE PQAAQQALDI IAALYRHEKH IRHKQLDLAD IHAYRQQHSE PLVTDFFRWV YQQRQRTDLL PKSPFAKALH YAHERESQLK VFLGNPALPM DTNHLERALR VIPMGRKNYL FCWSELGAEQ LGILQSLMVT CRLQGVNPYH YLVDVLQRVA LHPARDVIDL TPRLWKQKYN QNRLVSDVKI LTSQH
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