| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01405 |
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| Symbol | |
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| ID | 6778678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1505588 |
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| End bp | 1507672 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642754840 |
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| Product | ABC transporter, ATP-binding/permease protein |
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| Protein accession | YP_002125710 |
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| Protein GI | 196156221 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.637071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGATA AAAAGGTCGT ACACGACGTA TCTTATTTAG AGCAGCAGGG CGGGGTGTTG
ATGGATTGTT TAATGACAAT CTGTCACGCA CATCATTTAG ATGTATCACG TGTAAGCTTA
CTTAGTGGGC TACCGTTAGA CCACGGTGAG TTATCTCCCA CGGGGTTTGA ACGGGCCGCT
AAAAGAGCTG GGCTTGCTAG CCGGACAGTT AAGCGTGATA TTGATCACAT TAACACGGCT
CTATTGCCCG CTGTTTTAGT GTTAAACGAA AAGCAAGCAT GTGTCTTACA CGGTTTATCT
CCGACGCATG CAAGGGTGTC TTACCCTGAG CTGGACGACG CTGTTGTTGA AGTGGCAAGG
GAAGAGCTAA GCGCTAGATA TACTGGCTAC ATTATTTTCG CTCGCCCTGA AATGCAGGCG
CAAGAGACAA ATGCAAACAT TGATAAATCG TCGGTAGGGC ACTGGTTGTG GTCGTCTATA
AAGACTGCGA AAGGGCTATA CCGAGACGTG CTGTTAGCGT CGGTTTTTAT CAGTCTTCTT
TCTATTGCGC TGCCTTTATT CGTGATGAAC GTGTACGACA GGGTCGTACC TAACGCGGCG
CTGGAAACCC TGTGGGCACT AGCAATTGGC GTTTTGATGG TATTAGCAGC CGACTTCCTG
CTGCGCATGC TGCGTCAATA TTTTGTGGAG CTAGCGGCAA GCCGTTTAGA TGTAACTCTT
TCTGCAAAAA TCATGGAAAA AGTGCTATCG ATAAACTTAG CGAATAAGCC TGCTAAGAGC
GGCGCGTTTA TCAACAGCTT ACAGTCTTTT GAAAGTATCA GGCAGTTTTT TGGCTCGGTA
ACGCTGGTTG CTTTAGTGGA CCTACCCTTC GGACTTTTAT TTGTCGTCAT TATTGCAATG
ATCGATATCT ACCTGATTAT CCCAATGCTT ATTGGCGCTA CTCTCTTATT TCTACACGCA
ATGAAAGCAC AGCGAGTCAT GCGCTCGTTG TCTGAAGAAT CGATGGAAAT AAGCTCGCGT
AAGAGCTCGC TTGTTACTGA AAGCGTAACG TCTTTGGAAG ACATAAAAGC ATTTGGTTAT
CAAAGTCGAA ACCAGAGCGC GTGGGAAAAA CAGACCATAT TTCTTGCTAA AGTTAATGCG
AAGCTTCGCT TAGTTTCCAT GTCGGTAAAT AACGCCGCAC TTTGGATTCA ACAGTCGGTA
GGCGTGGTCA TTATTTTAAC TGGCGTCTAT TTAATTATCG AAGGCGTAAT TACGCAAGGT
GGTTTGATTG CCGCTTATCT TTTATCTAGC CGCGCGATGG GGCCTGTTTC ACAAGCCGCA
TCGATGTTAG CCCAGTTCCA TCACGCGGAA ACCGCCAAAA ATGCCCTTGA TGAAATTATG
GCAATGCCTA GTGAATCGGG CAGTAATAAG CAGATTAAGA ACAACGTTGT ACTGAACGGC
AATATAGATG CAAACCAACT CTGCTTTAAA TATCCCGATG AAAATGTACT TGCACTTAAA
GACATTAACT TCTCGATTAA ACAAGGAGAG CATGTTGCCA TTTTAGGGAA AAATGGCTGC
GGTAAATCTA CACTTAATAA ACTCATTATG GGTTTTTACC GGCCTGAATC GGGACAGCTC
TTGATGGATG GTATCGATTT ACAACAATAC GATCCTACGC TGTTGCGCAA GCAAATTGGT
TATGTTCCCC AAGAAGTGAG CCTTTTTTAT GGAACGCTTA AAGACAATAT CATGCCTGAA
AACTTGAACA TGGATGATAG TGATTTCTGG GAAATATTAA GCCAATGTGG TTTAGCAAAA
TTGGTCAATA GTAGCGCGAA TGGGGTAGAG CAAATAGTTG GCGAGCGAGG CTCTCTACTC
TCGGGCGGAC AGCGACAAGC GGTCGCTATG GCAAGGGCGC TTGTTCGCGA TCCATCTATA
TACATTATGG ACGAACCTAC CTCAGCGATG GACTCGACTA ACGAAGCGCA AATGAAAGAG
ACCATAAAAG CCGCGACCGC AGGTAAAACT CTTATTATAA ATACCCATCG TACGACCTTG
CTTGACCTTG TAGAGCTCGT ACAGTTGGCT AAGAATTCCC GCTAA
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| Protein sequence | MKDKKVVHDV SYLEQQGGVL MDCLMTICHA HHLDVSRVSL LSGLPLDHGE LSPTGFERAA
KRAGLASRTV KRDIDHINTA LLPAVLVLNE KQACVLHGLS PTHARVSYPE LDDAVVEVAR
EELSARYTGY IIFARPEMQA QETNANIDKS SVGHWLWSSI KTAKGLYRDV LLASVFISLL
SIALPLFVMN VYDRVVPNAA LETLWALAIG VLMVLAADFL LRMLRQYFVE LAASRLDVTL
SAKIMEKVLS INLANKPAKS GAFINSLQSF ESIRQFFGSV TLVALVDLPF GLLFVVIIAM
IDIYLIIPML IGATLLFLHA MKAQRVMRSL SEESMEISSR KSSLVTESVT SLEDIKAFGY
QSRNQSAWEK QTIFLAKVNA KLRLVSMSVN NAALWIQQSV GVVIILTGVY LIIEGVITQG
GLIAAYLLSS RAMGPVSQAA SMLAQFHHAE TAKNALDEIM AMPSESGSNK QIKNNVVLNG
NIDANQLCFK YPDENVLALK DINFSIKQGE HVAILGKNGC GKSTLNKLIM GFYRPESGQL
LMDGIDLQQY DPTLLRKQIG YVPQEVSLFY GTLKDNIMPE NLNMDDSDFW EILSQCGLAK
LVNSSANGVE QIVGERGSLL SGGQRQAVAM ARALVRDPSI YIMDEPTSAM DSTNEAQMKE
TIKAATAGKT LIINTHRTTL LDLVELVQLA KNSR
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