| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01404 |
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| Symbol | |
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| ID | 6779102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1504914 |
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| End bp | 1505570 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642754839 |
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| Product | Thrombospondin type 3 repeat:OmpA/MotB |
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| Protein accession | YP_002125709 |
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| Protein GI | 196156220 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCTGCCT CGGGCAGTTT GGCGCAAACA TTAGGTATTA CAAAAGAAGG CGTACCTGAC
GTACTTGACA TGGCAGAAGA AAAAATCAGC TATGACCCCA ACTATGTTTG CCCTGTCGTA
CGCACTAACT TTGAAGATGA GCGAAACATT CTTAAGCGGG ATTCTGATGG AGATGGCATT
GTAGATTTGT GGGACGACTG TGTAGACTCA ACGCCAGGGG CTATGGTTGA TGATTTTGGC
TGTGAGGCAA AAGAACCAGA GCCGAGCGCT GCCGATTTCA CTCTTGACGA CGCTCAAATA
ATCGACTCTT TTAAGGTAAA CATAGAGTTT ACATCTAACT CCACAGACGT GTTGCCAGAA
TACGAAAACA ATTTGCAAGA CGTCATTGAC GCGCTAAATG CTAATCCAAA TTCAGGGGTG
ATTATTCATG GTCACGCCTC ACTTGATGGC GATGCAGCAT ACAATCAGCG CTTGTCAGAG
CGAAGGGCCA AGGCTGTTGC GTCTCTTCTT ATGACGAAAG CTGATATAGC GCCTCGTAGA
ATTACCGCTG TTGGCTATGG CGAAAGCCGC CCCTTGGTTA ATGAAGAGTC TGAGGCTGCC
AATGCGCGTA ACCGTAGAAT TGAGGCGGCT ATTATCCAGC TTCCCTCTAA CGAATAG
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| Protein sequence | MAASGSLAQT LGITKEGVPD VLDMAEEKIS YDPNYVCPVV RTNFEDERNI LKRDSDGDGI
VDLWDDCVDS TPGAMVDDFG CEAKEPEPSA ADFTLDDAQI IDSFKVNIEF TSNSTDVLPE
YENNLQDVID ALNANPNSGV IIHGHASLDG DAAYNQRLSE RRAKAVASLL MTKADIAPRR
ITAVGYGESR PLVNEESEAA NARNRRIEAA IIQLPSNE
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