Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01400 |
Symbol | |
ID | 6778832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1501560 |
End bp | 1503380 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642754838 |
Product | RTX toxin, putative |
Protein accession | YP_002125708 |
Protein GI | 196156219 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAGG TAAGCATTGT AGAAGTAAAT GGTGAAGCTT CTTTAGTACG TAGTGAAACA GGCGAGCAAA TTAACGCAGT GTCAGGTATG GCGGTTAACG AGGGCGATGT TTTAAATATT TCACCAGATG CCACCGTTAC CGTTAGCGTA AACGGTGAAC TTCGCACATT GCCAGCAGGG CAGACCGTAT CGTTCCCTCT ACAGTTAGAC TTTACGGACA GCAATACCGA CGACGAGTTT GCAGTTTTTG ATGAAAGCGT GGATGAACTT GCAGCACTGC TCGACGGCGT TGAAGGCACT GAGAACGCCT CTCAAGAGAA CGGTGACTTT TTAGACGTAC TTGCCGGAGA AGGCGATATC TTGGAATCGT TAGAAGCGAC AGCGGCAGGT CTTGATGGCG GCGCTGGTAC CGGTGGTGGT AGTAACTTTG TACGCGTAGA TCGCATCAAT GAAGACGTTG ACCCCGTAGG CTTTCAATTT GAACAAAATA ACAACAATGA CGGTGACATA ACCCCAACTG AATTCTCGGG GACCGGAGAG CAAGCCCAAG ATATATCGCT AACCTTAGAC CCTATTGGAT TAACCAACGA TACAACGCCG ACCATTACAG GTATCACCTC TGCCATTCCT GGTAGCACGG TAACCTTTAC AGTGACAGAC AGTGAAGGAA ACACTCAAAC ACTCACGGCG ATTGTTCAAG ATGATGGTAC GTTCAGCGCA GATGTTCCTA ATGCCTTAGC AGACGGTGAT TTTACTGTCG ACGCTACTGT GCTTGAGCCA ACTGGCAACA CCGCTGATGG CTCAACGACT GGCCAAATAG ACGCTACCGC ACCGACAATC ACTATAAATG CGCCAGGCTC GGATAACGAT ACCACGCCAA CCCTTACCGG TACCACTGAC GCGACGCAGG GCAGTACCGT TACCCTTACC ATTACTGATA GCGCGGGCAA CACGCAAACC GTGACCGCCA TTGTGCAGGC TGACGGAACT TACAGCGCAG ACGTACCGGC TGAATTGGCC GAAGGTGAAT TTACGATTAA TGCCAGCGTG ACCGACGAGG CGGGTAATAC CGATACCGAC ACAGGTACTT TAGTAATTGA TACCACTGCA CCTACGGTAG CCATTAACGA TCTAACCACC AACGACACCA CGCCAGAACT TACCGGTACG GTAAACGATC CGAACGCGGT TGTAGTGGTG ACTATTGACG GGAATGACTA CACCGCTACC AATAATGGTA ACGGTACCTG GACATTAGCT GACAATATTG TCGCATTACT CGCTGAAGGT AATTATACGG CAACGGTTAC CGCTACGGAC GCTGTGGGTA ATTCTGACTC AGCTACAGGT TCGATTGTTA TCGATACCAG TATTGATGAA AACAATAATG GCCAAACGGT GACGTTCGAT AGTATTTCAA ACGACTCTGG CGTGGCTGGA GACTTTATAA CTAGCGATAG CACGCTTATC TTTAATGGAA CGGTGGACCT TGGTGACAAT ACTACCCTAA CTGTTACCGT TGATGGAACG TCCTATACCT TTGGCACTGA CCCTGAACTT ACTATTGATG GCAGCGGCAA CTGGAGCCTG GATTTAACTG GCACACCGCT ACCAGCAGGC ACCTATGCCG TAGTGGCGAC AGTGACAGAT GAGGTCGGTA ATTCGGCGAG CACGGCAAGT CAAAATGTCG TCGTTCAGGC CCTCGATGCT ATAAACGACG GTAACGCCGT TGATATGGGT GAGCCTGTGG TGACGGTGAA CCCGCCAGAG ACCACCAGCA ACGACTATGG ATATTGGCGA CCCTGTTTCA ACAACGCCTG A
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Protein sequence | MAEVSIVEVN GEASLVRSET GEQINAVSGM AVNEGDVLNI SPDATVTVSV NGELRTLPAG QTVSFPLQLD FTDSNTDDEF AVFDESVDEL AALLDGVEGT ENASQENGDF LDVLAGEGDI LESLEATAAG LDGGAGTGGG SNFVRVDRIN EDVDPVGFQF EQNNNNDGDI TPTEFSGTGE QAQDISLTLD PIGLTNDTTP TITGITSAIP GSTVTFTVTD SEGNTQTLTA IVQDDGTFSA DVPNALADGD FTVDATVLEP TGNTADGSTT GQIDATAPTI TINAPGSDND TTPTLTGTTD ATQGSTVTLT ITDSAGNTQT VTAIVQADGT YSADVPAELA EGEFTINASV TDEAGNTDTD TGTLVIDTTA PTVAINDLTT NDTTPELTGT VNDPNAVVVV TIDGNDYTAT NNGNGTWTLA DNIVALLAEG NYTATVTATD AVGNSDSATG SIVIDTSIDE NNNGQTVTFD SISNDSGVAG DFITSDSTLI FNGTVDLGDN TTLTVTVDGT SYTFGTDPEL TIDGSGNWSL DLTGTPLPAG TYAVVATVTD EVGNSASTAS QNVVVQALDA INDGNAVDMG EPVVTVNPPE TTSNDYGYWR PCFNNA
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