Gene MADE_01382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01382 
Symbol 
ID6776855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1479422 
End bp1479937 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content44% 
IMG OID642754819 
Productouter membrane protein, OmpH family 
Protein accessionYP_002125690 
Protein GI196156201 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00169633 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACAGT TGGTTAAACA TATCGTTGCA GGAGCAATGT TGGGTAGCGC TTTAGTTAGT 
ACGTCTGTAA TGGCGGAGCA GAAAGTGGCT GTAGTAGACG TTCAAGGTAT TTTTCAAGCA
ATGCCTCAAG CGGCTGAAAT TCAAAACGCT ATCCAAGCTG AATTTAAAGA TCAGCTTGAA
GAAGTTAATC AACTTCAGCG CGACGGTCAG TTCTATGCCG AGCGTCTTCA GCGCGATGCA
GCGACAATGA GCGACACAGA GAAGAAAGAA CTAGAACAAA AAATCTTGTC AGTACGTGAA
GAGTTGTCTA AAAAAGGTCA ACCTCTTCAA CAGAACATCC AACGTCGCAG CAACGAAGAG
CGCAATAAAC TACTTGGTCT TATCAAGCAA GCCATCGACT CTGTTGCCGC TAAGCAAGGT
TACGACCTAG TACTTAATGC AGGTGCAGTT GCATTTGCAA AAGAAGAACA CGACCTATCT
GAGCAAGTTC TTCAGCAGGT TAGCAAAACT AACTAA
 
Protein sequence
MKQLVKHIVA GAMLGSALVS TSVMAEQKVA VVDVQGIFQA MPQAAEIQNA IQAEFKDQLE 
EVNQLQRDGQ FYAERLQRDA ATMSDTEKKE LEQKILSVRE ELSKKGQPLQ QNIQRRSNEE
RNKLLGLIKQ AIDSVAAKQG YDLVLNAGAV AFAKEEHDLS EQVLQQVSKT N