| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01364 |
|---|
| Symbol | ndk |
|---|
| ID | 6775397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 1462462 |
|---|
| End bp | 1462893 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642754801 |
|---|
| Product | nucleoside diphosphate kinase |
|---|
| Protein accession | YP_002125672 |
|---|
| Protein GI | 196156183 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0105] Nucleoside diphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTTG AGCGTACTTT TTCGATTATC AAGCCTGATG CGGTAGCTAA AAACGTTATC
GGTGCAATTT ACAACCGTTT CGAATCTGCA GGTCTTCGCA TTGTGGCATC TAAGATGATC
CACATGAGCA AAGAGCAAGC AGAAGGCTTT TATGCAGAAC ACAAAGAGCG TCCTTTCTTC
GGCGCACTTG TTGACTTCAT GACGTCTGGT CCAGTTATGG TTCAAGTACT AGAAGGCGAA
AACGCTGTTC TAGCTAACCG TGAAATCATG GGCGCAACTA ACCCAGCTGA TGCAGCTTCA
GGTACATTAC GTTCAGACTA CGCTGCGTCA ATCGACGAAA ACGCAGTTCA CGGTTCTGAC
GCGCCTGAGT CAGCAGCACG CGAAATTGCT TACTTCTTCT CTGAAGAAGA AATCTGCCCA
CGTACTCGCT AA
|
|---|
| Protein sequence | MALERTFSII KPDAVAKNVI GAIYNRFESA GLRIVASKMI HMSKEQAEGF YAEHKERPFF
GALVDFMTSG PVMVQVLEGE NAVLANREIM GATNPADAAS GTLRSDYAAS IDENAVHGSD
APESAAREIA YFFSEEEICP RTR
|
|---|
| |