| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01298 |
|---|
| Symbol | |
|---|
| ID | 6775641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 1390259 |
|---|
| End bp | 1391344 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642754735 |
|---|
| Product | predicted glycosyltransferase |
|---|
| Protein accession | YP_002125606 |
|---|
| Protein GI | 196156117 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.65788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGCC CTCTAATAGG CTTTTACCCC GCGACTAATT GGCATGCATA CCAAAAAGCA
ATGGCTCAAG CGCTTGAAAA AAACGGTTTT GAGGTAAAGA TTGGTCATGA ATTTACTGAC
AAAGCACTTA TGGCTTCCAA AGAAAGTGTC ATTCACTTTC ATTGGATAGA GCGCTTTTGG
GAAGGTGGTA CGCTTTTTCA GCAACTAAAG TCCATAATTG GCATGTTACG GTTCATGAAA
AGAGCGAAGC GATTGGGCAA AGTGATCGTT TGGACCGTAC ATAACCACAA GCCTCACGGC
AGAGTCACTT GGGCTGATTG GGTTGGTGTT CGCCTATTCT GTTTTTATTC TGACATTGTT
GCATGCCACA GTGAGTGGTC TAAAAAGTGG ATAGAAAGTT CAATGATGAC GAGAGCTAAG
GTGTGCATTG TTTATCATGG AAACTTCAAT AAAACTTTTA TACCGGTCGA AGACAACACG
AAATTAAAGA AAAGGTTTGG TATTAAGGAA AAGCAAATAT GTATTGGCTT AGTTGGCGAA
ATTCGACCAA ACCGTGGACA CGAATTGGCA CTAGAGTCTT TAAGAAATGT CGAGAATGCG
CAACTCTTGA TTGCTGGGCG CTGTAAAGAC AAAGCATATT TAGCCTTACT GGCCGAACGG
ATAACTAACT ACGGTTTAGG TGATAGGGTA AGGTTAGTGA GTAAAAACCT AACAGACACT
GAATTTAACG AGTTTTTAGC TATTTCTGAT ATCTCGCTGT TGCCGTATAA AGACATAACA
ACAAGTGGAG CGTTGTTAGC TTCTTGGACT GTTGGTACAC CTGTTGTTGC AAGTCGACTG
CCTTACTTTT CAGAAATGAT TAAAGAGAAT GACAATATTG GACAACTCTT TGATATTAAT
TCTTCACGTT CACTTACTAG TACTCTCAAA GAGCTATCCG ACAAATATAC CCACGAACAT
TGGATTGAGA AAAGGAAGCA GACGCTAGAA GAAGCCAAGA AGTACGATTG GAATAGGGTG
ATACGTCCTT TAGTAACGGA GATTAAGTCA AAGGTTACCT TGCATGAGGT AGATAAGCTG
AATTGA
|
|---|
| Protein sequence | MNRPLIGFYP ATNWHAYQKA MAQALEKNGF EVKIGHEFTD KALMASKESV IHFHWIERFW
EGGTLFQQLK SIIGMLRFMK RAKRLGKVIV WTVHNHKPHG RVTWADWVGV RLFCFYSDIV
ACHSEWSKKW IESSMMTRAK VCIVYHGNFN KTFIPVEDNT KLKKRFGIKE KQICIGLVGE
IRPNRGHELA LESLRNVENA QLLIAGRCKD KAYLALLAER ITNYGLGDRV RLVSKNLTDT
EFNEFLAISD ISLLPYKDIT TSGALLASWT VGTPVVASRL PYFSEMIKEN DNIGQLFDIN
SSRSLTSTLK ELSDKYTHEH WIEKRKQTLE EAKKYDWNRV IRPLVTEIKS KVTLHEVDKL
N
|
|---|
| |