Gene MADE_01268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01268 
Symbol 
ID6775770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp1363184 
End bp1363837 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content46% 
IMG OID642754705 
Producthypothetical protein 
Protein accessionYP_002125576 
Protein GI196156087 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.42865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA CACATTCTGC GTTTATCGGT CTTATGCAGC GCGCTCGCAA TGTGAAACGG 
TGGCCGCTTA TGGCACAATT CCAGGAAGAG ATGTTATCGA CCCACATATA CGAAGCCTCC 
TTTGTGGCCC ACATGCTTGG TGCGATAGCG TGCGATGTAT TTAACGAAGA CATCAACCCT 
GATAGGGTTG CGGCAATGGC TATCTTTCAC GAGGGAAGTG AAATTGCAGG GATGAGTGAT 
ATACCTAGCC CGGTTAAATA CCACGACCCG GAAACCACGG CTGCAATAAA AAAGCTAGAG 
CGTCGCTTTG AGCTAATGCT CATTAAGACT TTGCCCGAGG AATTACAGGC TAGATATATT 
CCGCTAATTG AGCAAAATAA AGATGACGAT CACGTAACGC TAGCAAAAGC TGCCGATGTC 
TTATGCGCAT ATTTAAAGTG CGATTATGAA CTGTCAAAAT CAAATTCTGA GTTTTCTAAC 
GCGATGAGAG AAATGGAAGT TCAGCTAAAG CGCTACCGCG AAAAGCTGCC CGCGGTAGAC 
TATTTCTGTC AGGTCTTCTT AGAAGATGCA AAGGGTACGT TAGACGAGCA AACCAAGAGC 
CTAGAGTGGA TAGAGCGCGC TAATACGCTT CACCTCACCT CAGATGACGC TTAG
 
Protein sequence
MAETHSAFIG LMQRARNVKR WPLMAQFQEE MLSTHIYEAS FVAHMLGAIA CDVFNEDINP 
DRVAAMAIFH EGSEIAGMSD IPSPVKYHDP ETTAAIKKLE RRFELMLIKT LPEELQARYI 
PLIEQNKDDD HVTLAKAADV LCAYLKCDYE LSKSNSEFSN AMREMEVQLK RYREKLPAVD 
YFCQVFLEDA KGTLDEQTKS LEWIERANTL HLTSDDA