| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01264 |
|---|
| Symbol | |
|---|
| ID | 6775739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 1359326 |
|---|
| End bp | 1362232 |
|---|
| Gene Length | 2907 bp |
|---|
| Protein Length | 968 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642754701 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002125572 |
|---|
| Protein GI | 196156083 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.744228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATATTTA GTCGTATATT TACGCCTTCA CACCAAAGCC CAAAACCAGA GAAACGCATT
CAGGCAATTG AAAGTCTCTC TCCAGTTAAG GCACAAGAAA AAACAATTCT TCACGAATTA
GCCTTCAATG ACGAAGACAG TAATGTCAGT TTGGCTGCTC TTGAAAAGCT TAATAGCTTT
GTTCTTTGGC TTAAAATGTC GCAAATTGCA AAGCAAACAC GAGTAAAGAA AACCGCTGAA
AAAAAGGTAA ACGAAGCGCT CGTAGGGGAA GGCGACCTCT CACTTTCATC TCAGGAAAAG
TTTTCGTTTT TAACCGAAAC GGCCAGTGCT GACTTAGTGG TGCAGATGCT ACCGCAAATG
CTATCAAAAG ACCCCGCGCT TTTATCAGAC GATAGTCTTG CGAAAGCGTT AATCGAAAAA
GTCGACAAGC CCTCGTTTAC GCAATACGTA TTTCTGGAAG GGGCGAGTGC GGGTTTACAA
ACCCAGCTCA TCAATGCTCA AGATAAAATA TCCGAGTTGC AGAAGCTGGC CAAAAAGGTC
TCAGATAGCG AGTTACTTGC GCAGATTGAT ACGCGAGTAG CGGCGATAAA AGACGCTCAG
CGCCGCCCCG TGGAGCTTAA AAAACAGCTT ACGTTAGTGT TGTCTAAATA CCAAGCGCTG
CTCGATAAGT CTGACGTGCA ATTCATCGAT GAAAAACAGC GGGAATTCGA CAGCGAGTTA
ACGGGATTAT TTGCGCAACT TGATTTACTC ACTCAGGACG AGCGCGCAGA GTATGACGAA
AAACGCACCC GTATATCTGA ACAGGTCGAG CGTTATTTAC AACGTATTCG TCCGGCGTGG
GAAGAGAAGC AGCAGGCCGC GCAGCTTGCC AATACGAAGG CTTTGTGCGA GCAACAGCTA
ACATACGCTA ACGAGCAAGT ATCTTGGCTA TATAATAATC GTCTTTGTGA GGCTACGCTT
GCCGATGTCG CCACGGTCAA CGAAAGTGTA CGCGGCGTAG AAGCGACGTT AGAACAGCTT
TCTCGAATGG AAAGCGAAAA CTCAAACGAG AAACGTATTG CAGAAATTAA GCGCGAAGTG
GACGGGTTGA ATGACCAACT AGAGCGGTTT TCAATGCAGC AGCAATATGG ACAAAAGCTG
CTTATTAAGC TGCAAACGTT AGAAGATATT GCCGCTAAAA TTGTTGATGC TTCTCAAAAC
GATGTGAACG AAGATAGCGC TAGTGAAGGT CTAGCAGCAG AAAGTAATAA CGTGGCCAGC
CTTAACGGTG CTTTCATTGA AGCGCGAAAC GATTATCAAG TGTTAAGCCG TGAATTAGCG
ACTATTCCAA AAGCGTTGAT GAAGCGCTTT AACGCTGCGA CTAAACGGGT GAACGCTAAC
GAGCGTGCGA AGAAATCGAA AGAAAGTGAG CAAGTGAAGC ACGTTAGAAA GCAAATTAGC
GTTATCGATA ACCTTATCGG GCAGGGTAAG TTCCGCGTCG CTATTGCTAA GTTTGCTAAG
CTTGACGAAA GCTATCATGC GCTGCCTAGT AATGCGAAAA AGCAGGTCGA AAAACGTTTT
GTAAAAACAG CTGAGGAGGT GTCGCATTTG GAAGGCTGGC AAGATTACCT TGCGGCGCCA
AGAAAGCCCG CGTTGGTTGA AGAAGCCAAA GCGCTAGCCT CAACACAGGC CGACAATATA
AAAGCACGAA GCGAAGCAAT TAAATACTTG CGCAAGCAGT GGCTGTCGTT AACCCCCTCA
TCTACCAGTA ATGGAAGTGA CGATGGTGAA GACGCTGCAT TACAGCAGCA GTTTGACGAA
GCTCTTGAAA AAGCGTTTGA GCCTTGCCGA GAACATTATG CCAAGCTTGA TGAGCAACGC
GCTCAGGCTC GTGAAAAGCG TATGTCGATC ATTGCAACTG TTAAGGCGAT AGACATCAAT
ACGCCTGAAT CAGAGTTGGT AAAAGTGTTC GATAAAGCTG CGAAACAATG GCATAGCGCC
GGTCAAGTTG AGCGCGAAAT ATACGAACCA CTTAAACAAG AGTGGAAAGC GGTATCGTCG
CCAATTCAAA GCAAAATACA GCAGTGGCAA AGTGGCAATC AAGCGCAAAA GCGCGCCTTG
GTTGCACAGG CTCAGCAACT TGCTACGGAA GATGATGTGC ATAGCGCTGC CGACAAATCA
CAGGGTTTAC AGGCTCAGTG GAAGCAAATC GGGCATGCAG GCAAGCGAGA AGAAAGTAAG
CTTTGGGCAG AGTTTAAAGC GGCAAATGAC GCGGTTTTCG AGCGACTTAA GGCTGAGAGA
AAAGTACAAA GTAACGCGTT TAATGCGCAA GTCGATGAGC TGCTTAGTAA AGTCGATAAT
ATCGATATTA AGAGTGACAG CGCGGCTTTC GATGAGATAG TAAGCGAAAT CAACGAACAA
CTTCGTGATT TACCTAAACC ACAACGCAGT AAAGTGGAAA GAAAGTTAGA AGCCTTAGAG
GCAAAACGTG TTTCGCTCGC GAAAAGCGCT CAATCTCAAG CTCGGGTACA AAAAGCACAA
GCGCTTAGTT CATTACTTCT TCTTAACGTA GGGGAGGGCG GCACCGCTCG GGAAGGCGAT
GAAGAGACCT TACTTGAAAC AGTGGGCAGA CGGTGGTCAA GCCTTCTTAG GCAATCTGAT
GGTAATGCCA GCTGTCAGCA CGATAGGCAG TGGCTAACGG TGGCGTTAGA AGTTGCTACA
GATATGCCAA GTCCGGCCGC TGATGCATCA ATACGTTCCA GCGTACAGTT ACAAATGATG
ACGGCGAAGT TAGAACAAGG GCAAGCCGCT ACAGCGCCCG ATATTTTGGC CGATTGGCTA
TCCTTTGATG TGCTGTGTGA AAAGGACAAA CACTTGGCGC AACGGGTTGT TGCGGTTATT
GATGCGTACC CAGAGGTGGT GGCTTAA
|
|---|
| Protein sequence | MIFSRIFTPS HQSPKPEKRI QAIESLSPVK AQEKTILHEL AFNDEDSNVS LAALEKLNSF
VLWLKMSQIA KQTRVKKTAE KKVNEALVGE GDLSLSSQEK FSFLTETASA DLVVQMLPQM
LSKDPALLSD DSLAKALIEK VDKPSFTQYV FLEGASAGLQ TQLINAQDKI SELQKLAKKV
SDSELLAQID TRVAAIKDAQ RRPVELKKQL TLVLSKYQAL LDKSDVQFID EKQREFDSEL
TGLFAQLDLL TQDERAEYDE KRTRISEQVE RYLQRIRPAW EEKQQAAQLA NTKALCEQQL
TYANEQVSWL YNNRLCEATL ADVATVNESV RGVEATLEQL SRMESENSNE KRIAEIKREV
DGLNDQLERF SMQQQYGQKL LIKLQTLEDI AAKIVDASQN DVNEDSASEG LAAESNNVAS
LNGAFIEARN DYQVLSRELA TIPKALMKRF NAATKRVNAN ERAKKSKESE QVKHVRKQIS
VIDNLIGQGK FRVAIAKFAK LDESYHALPS NAKKQVEKRF VKTAEEVSHL EGWQDYLAAP
RKPALVEEAK ALASTQADNI KARSEAIKYL RKQWLSLTPS STSNGSDDGE DAALQQQFDE
ALEKAFEPCR EHYAKLDEQR AQAREKRMSI IATVKAIDIN TPESELVKVF DKAAKQWHSA
GQVEREIYEP LKQEWKAVSS PIQSKIQQWQ SGNQAQKRAL VAQAQQLATE DDVHSAADKS
QGLQAQWKQI GHAGKREESK LWAEFKAAND AVFERLKAER KVQSNAFNAQ VDELLSKVDN
IDIKSDSAAF DEIVSEINEQ LRDLPKPQRS KVERKLEALE AKRVSLAKSA QSQARVQKAQ
ALSSLLLLNV GEGGTAREGD EETLLETVGR RWSSLLRQSD GNASCQHDRQ WLTVALEVAT
DMPSPAADAS IRSSVQLQMM TAKLEQGQAA TAPDILADWL SFDVLCEKDK HLAQRVVAVI
DAYPEVVA
|
|---|
| |