| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01253 |
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| Symbol | |
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| ID | 6777996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1348147 |
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| End bp | 1350234 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642754690 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_002125561 |
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| Protein GI | 196156072 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.358953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAGA TACAAAACGC TGCGCCAATT AAACAAAGTG GAATGGGAAA AGCGTTCCCT
CTTGGCGCCA CAATTACACA AGAAGGCTGT AATTTTGCTG TTTATGCCCC CGATGCAAAA
GCGGTGGTGT TGTGCTTCTT TAATAGTGAT ACAGAAGAAG CGCTAGATGA GTTCCCGTTA
CCCGAAAAAA CAGGCGATGT GTGGCATGGC CTGTTTACTG GCGTAAGCGC CGGGCAGTAC
TATGGTTACC GGGTTGAGCG CAATGAAGCT GGTTTGCACT CAGTACCTAC AGACAAATTG
CTGATAGACC CCTATGCGAA AAAAATAAGC CGTGCAATAA AGTGGGACGC GCGACGATAC
AAGCATGACT CTCAATTTAT GACCCCCAAG TGTATTGTCA TCGACGACAG TGATTACGCT
ATCAGTCACG CCAGTGCACC AGTCATCCCT AAACACAAAC GGGTTGTGTA TGAGGCTCAC
GTTAAAGGGC TTACCAAGCT TCACCCCGGT GTTCCTAAAG AGCACAGGGG GAAGTTTATC
GGGGCGGCGC ATTCAAGCGT TATTAAACAC CTTAAAGCGC TGGGTATCAC AACAGTACAA
TTTATGCCGC TGTGTTCATT TATGCCAGAA CCCTTCATCA CCGATAAGGG ATTAACGAAT
TACTGGGGTT ATAATCCGGT AAACTTTTTC GCGCCTGAAC CTCGCTATGG TGTGTCAGAT
GCCCTGGTCG AGTTAAAGGA GATGGTTGAT GCTTATCACA GCGCGGGGCT TGAAGTCATC
GTCGATGTGG TATTTAACCA CACGGCAGAG GCAGGCAATG GCGGCCCTAT TTTATCGTAT
AAAGGGTTTT GCCCGTATCA AGCGTATTTA CTTGAGCAGA CTAAAACCGG AGAACTGGTG
TATTCCAACC ATTCAGGCTG TGGCAATACG GTGAACACCG CGCAACCTTT CATGATGGGC
CTTATTCTCG ATGCGATGCG CCATTGGGTT ACGGTCATTG GGGTTGATGG CTTTAGGTTT
GATTTAGCCG TATGCTTGGG CCGAGAGCCG CAGGAGTACA ATAAAAAGTC AGGACTGCTA
CGCGCAATAA GTAGCGATCC AGTGTTGCGA GATAAGGTTT TACTTGCTGA GCCGTGGGAC
ATTGGCCCAG GTGGTTATCA AGTGGGTAAT TTTCCTTCTC CGTGGCTAGA AGTGAACGAT
AAGTACCGCG ACACGGTTCG CGCCTTTTGG CGCGGCGATG ACGGTGTAAC GGCAGACTTT
GCTACCCGGC TGATGGGCTC CAGAGATATA TTCCACAAAG GCCATCGACA TATTAGTACC
TCGGTAAATA ACGTAACCTA CCACGATGGT TTTACGCTAC ACGATATGGT GACTTATGCC
GAACGTCATA ATCTCGATAA CTTAGAAGAC AACAGAGATG GCCACGGCCA TAACCTCTCG
GCAAACTATG GCGTTGAAGG CGAAACCAAC GACGAATCGA TTATCGACAT GCGCGAACGT
CAAAAGCGAA ACCTTTTTGC TACGCTAATA TTTTCTCAGG GTACACCTCA CATTCTTGGG
GGAGATGAGC TAAGTCGCAC TCAAAACGGC AATAATAATG CGTACTGCCA AGATAACCCT
ATTAGCTGGT TAAACTGGGA GATGAATAAG CGTAAACAAG ACTTTCTGCG CTTCTGCCAA
TACGCTATTC GGTTGCGTCA GTCGTCTACC TTGTTAAGTG AGTTAAAGCT TCATGATGAT
GCATTCACAC TGTCTCGAAA CGTGAAGGAA ATCAATTGGT ATAAGCCGGA TGGTTCTGAT
AAAGCATCTG AAGACTGGAA TGTGCATCAC AACAAAGCGT TTGGCGTTGA AATTAAAGGT
TGTATCGTGG GCGACCAAAA ACCAGAACAC TGGTTTTTAT GCGTAAATGC CAGTGAAAAC
GACGTGCGGT TTCACTTGCC TTCCGTGCTT CCTAAAGGGG GGTGGACGAT GCATCTTGAT
ACGCGCTATA ACTCTCTTGA AGAACAACCT TCAATTTGTA TACAAAAGGT GTTTTTACAA
GCAAGCAAAT CGCTCACGTT ATTTAGCTTT GCGCATTTTT CCGGTTGA
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| Protein sequence | MKEIQNAAPI KQSGMGKAFP LGATITQEGC NFAVYAPDAK AVVLCFFNSD TEEALDEFPL
PEKTGDVWHG LFTGVSAGQY YGYRVERNEA GLHSVPTDKL LIDPYAKKIS RAIKWDARRY
KHDSQFMTPK CIVIDDSDYA ISHASAPVIP KHKRVVYEAH VKGLTKLHPG VPKEHRGKFI
GAAHSSVIKH LKALGITTVQ FMPLCSFMPE PFITDKGLTN YWGYNPVNFF APEPRYGVSD
ALVELKEMVD AYHSAGLEVI VDVVFNHTAE AGNGGPILSY KGFCPYQAYL LEQTKTGELV
YSNHSGCGNT VNTAQPFMMG LILDAMRHWV TVIGVDGFRF DLAVCLGREP QEYNKKSGLL
RAISSDPVLR DKVLLAEPWD IGPGGYQVGN FPSPWLEVND KYRDTVRAFW RGDDGVTADF
ATRLMGSRDI FHKGHRHIST SVNNVTYHDG FTLHDMVTYA ERHNLDNLED NRDGHGHNLS
ANYGVEGETN DESIIDMRER QKRNLFATLI FSQGTPHILG GDELSRTQNG NNNAYCQDNP
ISWLNWEMNK RKQDFLRFCQ YAIRLRQSST LLSELKLHDD AFTLSRNVKE INWYKPDGSD
KASEDWNVHH NKAFGVEIKG CIVGDQKPEH WFLCVNASEN DVRFHLPSVL PKGGWTMHLD
TRYNSLEEQP SICIQKVFLQ ASKSLTLFSF AHFSG
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