Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01245 |
Symbol | |
ID | 6777931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1336983 |
End bp | 1337675 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642754682 |
Product | 6-phosphogluconolactonase |
Protein accession | YP_002125553 |
Protein GI | 196156064 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
TIGRFAM ID | [TIGR01198] 6-phosphogluconolactonase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.115638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCATTAA CAACTCTATC ATTTGAAACA CCTGACGCAC TTACCGACGC CTTTGCGCAA GACTTGGTAA GTATTTTAAA AACAGGGATA AAAACTCGTG GTCGTGCATC GCTTATCGTG AGTGGTGGTC GTACGCCTCT TGCGCTTTTC AAGCAGCTAA GCGAAACCGA ACTTGAGTGG GATAAGGTTG ATGTAACGCT TGCCGACGAA CGCTGGGTTG AAGAAGGTCA TGAGGCCAGC AATACCAGCT TAGTAAAAAA TAACTTAATT CAAAATAAAG CCGCAGCAGC ACGTTTTATC GAACTTAAAA GCGATGCTGA TGATGCAAAT GAAGGCGTGA ATGCTGCTGA GTCTAACTTA GCTAGTATGT CGCAGCCTTT TGATGCATTA ATTCTTGGCA TGGGGGAAGA CGGTCACACT GCATCGCTTT TCCCTTGTTC TGAGCAAGTA CTTGACGGTT TAGATATGAG CAGCGGCAGA ACCTGCATTG CTGTTCAACC TACAACAGCA CCTCATCAAC GTATTTCATT AACGCTGCCT GCGTTACTTA ATAGTCGAAA TATCTTTTTG CATTTAACGG GCGAAAAGAA GAAGCAAGTA TTGCTTGACG CTATTGACAA TGCCACCGAA GCGCAAAAGC CCATCACAGC CGTTGTTAAC CGAGCGCCGG TTACCTTGAT GTGGGCGCCA TAG
|
Protein sequence | MALTTLSFET PDALTDAFAQ DLVSILKTGI KTRGRASLIV SGGRTPLALF KQLSETELEW DKVDVTLADE RWVEEGHEAS NTSLVKNNLI QNKAAAARFI ELKSDADDAN EGVNAAESNL ASMSQPFDAL ILGMGEDGHT ASLFPCSEQV LDGLDMSSGR TCIAVQPTTA PHQRISLTLP ALLNSRNIFL HLTGEKKKQV LLDAIDNATE AQKPITAVVN RAPVTLMWAP
|
| |