| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01179 |
|---|
| Symbol | |
|---|
| ID | 6775947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 1260021 |
|---|
| End bp | 1261253 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642754616 |
|---|
| Product | putative periplasmic protein |
|---|
| Protein accession | YP_002125487 |
|---|
| Protein GI | 196155998 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.383601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTAGGTG TTGCCTCGGC CGTTTCCATT TCAACGCCAA GAGCATTGGA AGAGGCTAGT
ACTGCTTCTG CCTTACAAGC ACAGTTAAAG CAAATGAAAA GTGCCTATGC TTTTTATTCC
TCTATCGCCC AGCAAGGTGG CTGGAAAGCC TTAAATGAAG ACTTACTTCT TAAAAATGGC
GCGTTAAGAA AAGCTGCGGC TGATGAAACG CCCATTTACA GTGAAGAGCA GGCTCAAGCG
ATAACTGCAT TGATCTCTCG TTTGGGCAGA GAATACCCCT CAATAAATAC AAACTGCACC
CATGCATTAA CAGCAGTTAA CTCCGCGCCA TGCGTTTTCA ATAAAGACGT TGAAAACGCT
GTGAAAGATT TTCAACGCCG TCACGGCCTT CTAGTAGATG GTGTAGTTGG AAGAAAAACC
CTTGCAGCGC TAAATGTGAC AGCAAAAAAG AAAGCGCAGC AACTAGCGCT AAACATTACG
CGCTTGGAAA TGTTTGAAGA AAAAGACAGT GACGCTTATG TGTTAGTTAA TATTCCCGAG
TTCCGTCTTC GATATATTAG TAACGGTAAA GTAAAAGCCA CTAAAGACGT GGTAGTAGGT
AAGCCAAGCT GGGCGACGCC TTCATTTAGC GATCACATAG AAAAATTTGT AGTTAACCCA
GAATGGCGTA TCCCGATTTC TATTGCCACG AAAGAAATAG CACCAAAAGT GGCGGATAAC
CCAAACTACT TAGAAGAAAA CAACATTGTT ATTCGCAAAG ACAGTTTTGT TGATGATGAG
TTGGTTGACC CCAATACGAT TGATTGGGAA GACATGAAGC CTTATCAGTT CGACCATTTT
TTAGTAAAGC TCCCCAACGA AAAAAATCCG TTAGGCAAGG TTAAATACCT TTTTCCAAAC
CGACACGCTG TATACGTGCA CGATACCCCT TATCAGCAAT GGTTCAAAGA AACGAACAGA
GCCGCCTCTC ACGGTTGCAT TCGATTAGAA GACCCTTTTT CTTTAGCCCA ACTTATAGCG
GAAGAGCAGG GCGTAGATAG CTTAATGGAT AATGTTATTT CGGCTCGCGA GCTAAGTCAG
TCTAAAACCT TTCACCTTGA AGAGCCTTTG CCTATTCATT TGGTGTACTG GACCGCGTGG
GCCGATGAAA ACGGTAAGGC TAACTTTAGA AACGATATTT ATCAGCGCGA TAGACGCGAT
GCCGAAGCGC TAACGCAGGT AGCGTCTTTG TGA
|
|---|
| Protein sequence | MVGVASAVSI STPRALEEAS TASALQAQLK QMKSAYAFYS SIAQQGGWKA LNEDLLLKNG
ALRKAAADET PIYSEEQAQA ITALISRLGR EYPSINTNCT HALTAVNSAP CVFNKDVENA
VKDFQRRHGL LVDGVVGRKT LAALNVTAKK KAQQLALNIT RLEMFEEKDS DAYVLVNIPE
FRLRYISNGK VKATKDVVVG KPSWATPSFS DHIEKFVVNP EWRIPISIAT KEIAPKVADN
PNYLEENNIV IRKDSFVDDE LVDPNTIDWE DMKPYQFDHF LVKLPNEKNP LGKVKYLFPN
RHAVYVHDTP YQQWFKETNR AASHGCIRLE DPFSLAQLIA EEQGVDSLMD NVISARELSQ
SKTFHLEEPL PIHLVYWTAW ADENGKANFR NDIYQRDRRD AEALTQVASL
|
|---|
| |