Gene MADE_01168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01168 
Symbol 
ID6778572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1245278 
End bp1245700 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content44% 
IMG OID642754605 
Productthioesterase superfamily 
Protein accessionYP_002125476 
Protein GI196155987 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.878559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAGA ATCCCTACGT TCAGCAATGG CACATAGATA AGACGCACAT TGACCACTAT 
CAGCATGTGA ATAATGTAGC GTACCTGTCT CAAGTAGAAA ATCTGGCTTG GGCACATTCA
AATTCGCTGG GCTTACACTT TGCAGATTAC CAGGCGCTAA ACCGAGGCAT GGTGATTAAA
CGTCACGAAC TCAATTATCA CCTGCCTACT CATCTTGGCG ACATCTTAGA ATGCGCCACT
TGGATTGTGC ATTGTGATAA CAAACTGACC TTGAAACGCC AGTTCCAGTT TATCTGCCCC
AAGCGAAACA AAACGGTTTT TGATGCCGTG ACAACCTTCG TATGCGTAAG TCTTGATACT
GGCGCGCCAA AGCGTATGCC GAAGCAATTT ATAGATGTTT ACGGAAAGGC ATGTATAAAA
TAA
 
Protein sequence
MLENPYVQQW HIDKTHIDHY QHVNNVAYLS QVENLAWAHS NSLGLHFADY QALNRGMVIK 
RHELNYHLPT HLGDILECAT WIVHCDNKLT LKRQFQFICP KRNKTVFDAV TTFVCVSLDT
GAPKRMPKQF IDVYGKACIK