Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01168 |
Symbol | |
ID | 6778572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1245278 |
End bp | 1245700 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642754605 |
Product | thioesterase superfamily |
Protein accession | YP_002125476 |
Protein GI | 196155987 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.878559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAGA ATCCCTACGT TCAGCAATGG CACATAGATA AGACGCACAT TGACCACTAT CAGCATGTGA ATAATGTAGC GTACCTGTCT CAAGTAGAAA ATCTGGCTTG GGCACATTCA AATTCGCTGG GCTTACACTT TGCAGATTAC CAGGCGCTAA ACCGAGGCAT GGTGATTAAA CGTCACGAAC TCAATTATCA CCTGCCTACT CATCTTGGCG ACATCTTAGA ATGCGCCACT TGGATTGTGC ATTGTGATAA CAAACTGACC TTGAAACGCC AGTTCCAGTT TATCTGCCCC AAGCGAAACA AAACGGTTTT TGATGCCGTG ACAACCTTCG TATGCGTAAG TCTTGATACT GGCGCGCCAA AGCGTATGCC GAAGCAATTT ATAGATGTTT ACGGAAAGGC ATGTATAAAA TAA
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Protein sequence | MLENPYVQQW HIDKTHIDHY QHVNNVAYLS QVENLAWAHS NSLGLHFADY QALNRGMVIK RHELNYHLPT HLGDILECAT WIVHCDNKLT LKRQFQFICP KRNKTVFDAV TTFVCVSLDT GAPKRMPKQF IDVYGKACIK
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