| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01076 |
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| Symbol | |
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| ID | 6778471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1139605 |
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| End bp | 1142973 |
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| Gene Length | 3369 bp |
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| Protein Length | 1122 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642754508 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_002125384 |
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| Protein GI | 196155895 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATCG TAGATATAGC CGTAAAACGC CCTGTTGCCG TAAGTATGTT CATCTTCGCG
GTATTGTTAT TTGGTATGGT GTCGTTAGGC AGACTATCGG TGAACTTGCT GCCAGACTTG
TCTTACCCCA CCCTTACTAT TCGAACCGAC TATGACGGCG CAGCGCCTGG TGAAGTAGAA
CAGCTAGTAT CCAAACCAAT AGAGGAAGCC ATTGGCGTAG TTAAAGGTGT GCGTAAAGTA
ACCTCTACTT CGCGAGCGGG TCAATCTGAT GTGGTGCTGT CTTTTGCTTG GGGGACCGAC
ATGGATTTCG CAAGCTTAGA GGTGCGAGAA AAGCTTGATG TATTGCAGCT TCCCCTCGAT
ATAGAAAAGC CACGACTGCT TCGCTTCAAC CCAAGTTTAG ACCCCGTTAT TAAACTGGGG
CTTACCGCAC AAAGTGACGC ATCAAGTTTG AGCATAGCGC AAATGAAGCG CCTTCGGTTG
TATGGCGAAC AACAAGTAAA GCGTTCTTTA GAGTCAGTCG AGGGGGTTGC TGCCGTTCGG
GTTGGCGGTG GTTTAGAAAA TGAAATTCAC ATTCTTATTG ACCAGCGAAA AGCCAGTCAA
CTCTCTATTC CTATTACCCG AATTACAGAG CGAGTAAGGG CTGAAAATAT TAATGCGGCG
GGAGGCAGAA TTGATAACGC CGCACAGGCA TTTTTAGTAA GAACCCTTAA TCAGTTCGAA
ACACTAAACG ACATAGAAAA CCTATTTATA GGTCGTTTTG AAGGTAGAAA CATTCAGCTT
AAAGATGTAG CAACAGTAGA AAATGCGTAT AAAGACCGAG ATGTAGTAAC GCGCTTCAAC
GGTAGCGAGG GGATCGAAAT TGCCATCTAT AAAGAGGGTG ATGCTAATGC GGTAAACGTC
GCGCAGAAAG TGGCGAAGCG TTTAAGTGAA GTGAACGACA ATTTGCCCGC TAATTATATG
CTTAGTGAAA TTTACGACCA AAGCGTATTT ATAAAGCAAG CCATAGACAA TGTTAAATCG
GCTGCTGTTA TGGGCGGTGT ACTTGCCATG TTAGTCCTGT ACCTATTCTT GAAAGACTTT
TGGGCAACGA TCATTATTTC CGTGTCTATT CCGGTATCAG TCATTGCTAC CTTCAATTTG
ATGTATGCCA ATGACATCAG TTTGAATATG ATGAGTTTGG GCGGTATTGC CCTTGCCGTA
GGACTGCTTG TCGACAACAG TATTGTGGTG CTTGAAAACA TTGATCGTCA TAAAAAGCTA
AAAGCGTCAG CAAGCGATGA AGCGGTAGCG GGTGAAGGCG TTGCATCGGC CGCTAGCGAC
TCTGCTGCTA GCGAGGGCAC AAAGGAAGTC TCTGGAGCTA TTATTGCCTC TACCCTTACC
ACCATGGCGG TGTTTGTACC GCTTATTTTT GTTGAGGGCA TTGCAGGGCA ACTGTTTAAA
GACCAAGCCC TAACCGTGTC ATTCGCCTTG GCCGCATCGT TAGTGGTAGC GCTAACCCTT
ATACCTGCCA TGGCGCATAA ACGGAAGAAG CAGCAGCTTG ATCATGAAGA CGTATTTACT
ACGCCACCTG CTGTGCGCCC TACTTCGACA TTGGGCAAAA TGATGTACTG GGTTACGTTA
CCAATTCGCT GGGTATTTAA ACTGGTCTTT GTATTTTTAC CTGCAGCTTT AGTTACGCTA
GTAATAGGTG GATGGCATAT CACGAGTAGG GTTTTAGGCG CAGCGTTTAA ACCCCTAATT
TGGGCGTTCA ATAAAGGCTT TGACCTACTT GCCTCAGCGT ATGAAAAACT ACTTAGCATC
AGCCTTCGCG CAAGAACCGC GGTGCTTTCT ATTGCTTTCG TACTGGCTGC TGGTGCCGTT
GTACTTGTAC CTAAACTTGG TATGGAGCTT ATACCCACCT TATCTCAAGG AGAATTTTCA
GTAGAAGTTA CGCTACCTGC AGGTTCGCCC CTCGCCCGCA CCGATGCGAT TATTAACGAG
CTTGCCAATG TGGCATCTGC GAGTGAATCG AACGTGCTGC GCACCTATGC TATGTCGGGA
ACAGGCAGCC TAATAAGTGC TGCACCTAAT CAAGGGGGTG ATCATTGGGG CCGTTTAAAC
ATTGTTATGC AGCCCATTGC AACCCCACAA GATATGGCTG ATGTTAAAAA TGCGCTACGA
GATAGCTTAG CGTTTAAACC TGAGGTTCAG GCCACGTTTT CAGAACCCGA ACTGTTTAGC
TTTGCCTCGC CTATTCAAAT TGAAATTGCA GGGTACGATC TCAAGCAATT ACAACAATAT
GGCGACGCTA TTGCCACGAA ACTTGCCAGC TACGGCAACT TTACCGATGT GACTACCAGC
ATTCGCGATG GAAACCCTGA ACTTAAAATT GCGTTTCACC ATGCTAAACT CGCTCGCTTG
GGGCTTGACG CAGCAGGTGT TTCGCAGCTT ATTGCAGCAA AAGTAGGCGG CCGTATTGCC
ACACAGTACA GTGTTGAAGA TAGAAAAGTT GATGTACTGG TTCGAACGCA GGAAAACCAG
CGAGATGATA TAGCCAGCAT AAGGGCGATA GTAGTAAATC CGGGCTCGGT ACAGCCTATA
TCGCTTAGCG CCGTGGCAGA TGTGTATATG AGCGTAGGCC CTAGTGAAAT AACGCGTGTG
GGCCAGCAGC GTGTAGCGCT GGTTTCAGCA AACTTAGCCA AAGGGAAACT CGATGAAGCC
GTTGCCATCG CCAATACAGT TATTGACGGC ACGCAGCTTC CCCTATCGTT AAGCGCCTCG
GTAACCGGTC AGAGCGAAGA CATGCAAAGT AGCTTTCGCT CGCTACAGTT TGCGCTAGCG
CTTGCGGTAT TTATGGTTTA TCTGGTTATG GCGTCGCAAT TTGAATCATT ACTTCACCCT
TTGCTAATCC TTTTTGCTGT GCCTTTAGCC GGCGCAGGCT CGGTTTATGG TTTGTGGCTA
ACCAATACAC CACTTAACGT AGTTGTGTTT ATTGGTTTGA TCATGCTTTG TGGCATTGTA
GTGAATAACG CCATAGTGTT GGTAGACCGC ATCAATCAGC TACGTCGCCA GGGGTTAGAA
AAAAACGTGG CTATTATGCA AGCCGCAAAA ACCCGTTTGC GCCCTATTGT AATGACAACC
TTAACCACGG TATTAGGTTT ACTTCCAATG GCATTCGGCC TAGGCGAAGG AGCAGAGATT
CGTACGCCGA TGGCCATAAC CGTTATTTAT GGACTGCTGT TTGCAAGCTT ACTAACCCTT
ATATTATTGC CTGTGCTTTA TAGCTTATTC GATGTTAAGA AAACCCTTGT TAAAAAAGAC
CCGGTAAAAA CTAACGCGAG TTTAAGCTAC AGCGACGAAG ACAGGTTGTC AAAAGGGGGT
GTGCTATGA
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| Protein sequence | MRIVDIAVKR PVAVSMFIFA VLLFGMVSLG RLSVNLLPDL SYPTLTIRTD YDGAAPGEVE
QLVSKPIEEA IGVVKGVRKV TSTSRAGQSD VVLSFAWGTD MDFASLEVRE KLDVLQLPLD
IEKPRLLRFN PSLDPVIKLG LTAQSDASSL SIAQMKRLRL YGEQQVKRSL ESVEGVAAVR
VGGGLENEIH ILIDQRKASQ LSIPITRITE RVRAENINAA GGRIDNAAQA FLVRTLNQFE
TLNDIENLFI GRFEGRNIQL KDVATVENAY KDRDVVTRFN GSEGIEIAIY KEGDANAVNV
AQKVAKRLSE VNDNLPANYM LSEIYDQSVF IKQAIDNVKS AAVMGGVLAM LVLYLFLKDF
WATIIISVSI PVSVIATFNL MYANDISLNM MSLGGIALAV GLLVDNSIVV LENIDRHKKL
KASASDEAVA GEGVASAASD SAASEGTKEV SGAIIASTLT TMAVFVPLIF VEGIAGQLFK
DQALTVSFAL AASLVVALTL IPAMAHKRKK QQLDHEDVFT TPPAVRPTST LGKMMYWVTL
PIRWVFKLVF VFLPAALVTL VIGGWHITSR VLGAAFKPLI WAFNKGFDLL ASAYEKLLSI
SLRARTAVLS IAFVLAAGAV VLVPKLGMEL IPTLSQGEFS VEVTLPAGSP LARTDAIINE
LANVASASES NVLRTYAMSG TGSLISAAPN QGGDHWGRLN IVMQPIATPQ DMADVKNALR
DSLAFKPEVQ ATFSEPELFS FASPIQIEIA GYDLKQLQQY GDAIATKLAS YGNFTDVTTS
IRDGNPELKI AFHHAKLARL GLDAAGVSQL IAAKVGGRIA TQYSVEDRKV DVLVRTQENQ
RDDIASIRAI VVNPGSVQPI SLSAVADVYM SVGPSEITRV GQQRVALVSA NLAKGKLDEA
VAIANTVIDG TQLPLSLSAS VTGQSEDMQS SFRSLQFALA LAVFMVYLVM ASQFESLLHP
LLILFAVPLA GAGSVYGLWL TNTPLNVVVF IGLIMLCGIV VNNAIVLVDR INQLRRQGLE
KNVAIMQAAK TRLRPIVMTT LTTVLGLLPM AFGLGEGAEI RTPMAITVIY GLLFASLLTL
ILLPVLYSLF DVKKTLVKKD PVKTNASLSY SDEDRLSKGG VL
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