| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01058 |
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| Symbol | |
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| ID | 6776273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1120026 |
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| End bp | 1122608 |
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| Gene Length | 2583 bp |
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| Protein Length | 860 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642754490 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002125366 |
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| Protein GI | 196155877 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCGC CTACACCTGC TCTACCTACG TTAAATAAAA TCACATTTTA CCTATTGGGT
GCGCCTTTAC TCGTGGCTAT ACCTATTCTG GCTTATGCAG AAGTTGATGA TGTTTCTCAA
CCCACTACGA GCACGCTTGA GCACATTGTT GTTCATGCCC AGAAAACACC GCAGAATTTG
CAGGATGTGC CAGTGGCAGT TACTGCGTTA TCTGGCAAGG ATTTAGTCGA AACCGTAAGC
AGAGATGTGT TTGACCTTCA AAATTACGTG CCTGCTTTCG GCGCGTTTCA AAACCAAAGT
GTAACTAACT CAGGCTTTTC TATACGAGGT ATCGGTACTT CTTCACAAAA CTTTGGTTTC
GAGTCTTCTG TTGGACTCTA TGTTGATGGC GTTTATCGCT CTCGGCAGAA TGCTCTTATC
AATGATGTAG TCGATATTGA ATCGATAGAA GTTTTACGCG GCCCGCAGGG CACCTTGTTT
GGCAAAAATA CTGCTGCGGG GGCCATGACA CTTACCACTA CTCCCCCTTC CCATAACGAT
CGCGACGGTT TTGCTGAAGC TATTGTCGGG AACGATGCGC TTGTGCGCTT AAGCGCCGGC
TCGTCCTTTT CACTTGTTGA AGATATTCTG GCGCTTCGCC TATCCGGCTT CACGTCGCAC
AGCGACGGCT TTATTACAGA CAAAGAAAGT GGAAAAACGC TTAACAACCG AAATCGCTCT
GCTATCAAAG CGCAGTTGCT GTATACACCT AGTGACAGCG TTAGCGTAAA GGTAATTGCC
GACTATGGCG AGTTAGACGA ACGCTGCTGC GGCGCTCTTA CCTACCAAAA CAATATACAA
GCAAACCAAG TAGAGGGTAA GTTCGGTACT GATGCGTTAC TTTTACAGCC CCCCTTCGAC
GCCACGGTAT ACGGGCGCGA AGACTTTTAC CGTTTCAATA CGTCGTTGTC TCAAACGCCC
ATATCTCAAA TGGAAGATAA AGGCCTATCG GTTCAAGTTG ATTTCGATAT TAATAAGGCG
TGGCATTTAG TAAGTATAAG TGCCTATCGG GCATTTGACA GCCTAGACTC GGTAGATACT
GACTTTTCTA ACGCGGATTT ACTTAATGCG ACCAACGATG CGCAGCAACA GTCGTTCTCT
CAGGAGCTAA GGCTTCACTA TCGCAGTGGT GTACTTGAAG GACTCATTGG TGCCTACTAT
TACAGTCAAA ATTTAGACCT TACTTTTGAT ACAACAACTC AGGCCGATTT CAGCGTGTTT
TTTAATGCGG TCGCAGGTGA CTTACTCCCA TTAGCAAACG CTATAGATGA ACTCAGTGCG
CTAACCTCTG GTCTTATTGC CCCTTCTGCT TCTCCAGCGC CACCCAACAC CGCTTTTATA
CATAATGCAG ATCAAGAGCA AGACAGTTTT GCAGTGTTTA CTCAATTCGA TTGGCGGTTT
AGCGATATGC TAACCCTGAC CTCGGGGTTA CGATTTACGC AAGAAAAGAA AACAATTAAA
GGCCAATTTG ATGAACAAGG GCCAGGGATT GATGGCCTGG AACAAGATCC TACAAAGTGG
CCGAATATCA ACATCGCTCT CCTTGGCTTG CAAGAAATTG GGGCCGCATT GGCGCAAGGG
GACTTTCCTT CACAAAGTTC GCTTAACGCC ATAGCCCCCT TCCAACAAAC GGGCTGGGGT
TACTTCTTTT TCGGCTCAGC TGCCGTAATG CCCCGCCCAG ATTTGAATGA AAGCATAGAA
GATGACCAGC TCACAGGTAC AGTAAAGCTA GCTTACCACC CTCAAGACAA CACCTTAGCG
TATGCAAGCT TCGCCACTGG CTATAAAGCG GGAGGGACTA ACACAGATAG AATTCTTCCG
GGCCTAAGCC CGCTATTTAA CGCAGAAAAA TCTCGAAGCA CTGAAGTCGG TATAAAACAC
GACTTTGAGG ACGTCGGCCT TAGGGTAAAT GCGGCGGCGC ACTACACAAA AATTCAAGAT
TTTCAGGCAA CCACGTTTAC TGGCACCGGG TTTAACTTGC AAAACGCGGG AGATATCGCG
GTTAGAGGTA TTGAGCTAGA AGCAACGTGG CTAATCACAT CAAACACAGA ATTACACGCT
AACGCATCGC GCACGCTTGC TAATTTTGAC GAGTTTAAAC AAGGCACGTG TTGGGTGGCT
TACACCTGGC ATACCGGCAT CGACGACCCG GGCCGGGTTA ATCCTGGCGA TCCGTTTTGT
GCAAGAGACG GCGATCGCGT GGGGTTCGAG CCGCAAAATT CTCTATCACT GATGCTTAAC
CACCATTTTG CGCTTGGTAA TTACCCGCTT ACCGCCAGTA TTGACTATCA ATACACAGGT
GATGTTTTTC TTGATGATGC CAACGACCCT TACAAATACT CAGGCGCATT TTCGCAGTTT
AATGCAAGAT TACGCGTGAA GATTACTCAA TGGGACAGCG AAATCATAGC GTGGTCGCGC
AACCTATTCG ATGAACAGTA CGTTGCGCGA AGCGGTTTCG ACGTGCCGGT ACAAACCGGC
AAAATCATGG CCTATCCCGG CGCACCAAGA AGCTTTGGCG TGACTTTCAG AAAGACGTTT
TAA
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| Protein sequence | MKSPTPALPT LNKITFYLLG APLLVAIPIL AYAEVDDVSQ PTTSTLEHIV VHAQKTPQNL
QDVPVAVTAL SGKDLVETVS RDVFDLQNYV PAFGAFQNQS VTNSGFSIRG IGTSSQNFGF
ESSVGLYVDG VYRSRQNALI NDVVDIESIE VLRGPQGTLF GKNTAAGAMT LTTTPPSHND
RDGFAEAIVG NDALVRLSAG SSFSLVEDIL ALRLSGFTSH SDGFITDKES GKTLNNRNRS
AIKAQLLYTP SDSVSVKVIA DYGELDERCC GALTYQNNIQ ANQVEGKFGT DALLLQPPFD
ATVYGREDFY RFNTSLSQTP ISQMEDKGLS VQVDFDINKA WHLVSISAYR AFDSLDSVDT
DFSNADLLNA TNDAQQQSFS QELRLHYRSG VLEGLIGAYY YSQNLDLTFD TTTQADFSVF
FNAVAGDLLP LANAIDELSA LTSGLIAPSA SPAPPNTAFI HNADQEQDSF AVFTQFDWRF
SDMLTLTSGL RFTQEKKTIK GQFDEQGPGI DGLEQDPTKW PNINIALLGL QEIGAALAQG
DFPSQSSLNA IAPFQQTGWG YFFFGSAAVM PRPDLNESIE DDQLTGTVKL AYHPQDNTLA
YASFATGYKA GGTNTDRILP GLSPLFNAEK SRSTEVGIKH DFEDVGLRVN AAAHYTKIQD
FQATTFTGTG FNLQNAGDIA VRGIELEATW LITSNTELHA NASRTLANFD EFKQGTCWVA
YTWHTGIDDP GRVNPGDPFC ARDGDRVGFE PQNSLSLMLN HHFALGNYPL TASIDYQYTG
DVFLDDANDP YKYSGAFSQF NARLRVKITQ WDSEIIAWSR NLFDEQYVAR SGFDVPVQTG
KIMAYPGAPR SFGVTFRKTF
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