Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01042 |
Symbol | |
ID | 6776278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1104736 |
End bp | 1107183 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642754474 |
Product | predicted extracellular metal-dependent peptidase |
Protein accession | YP_002125350 |
Protein GI | 196155861 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCAAT TGAACATTTT TCATAAAGCG GCGCGACAAG TAAAAGCTTC TGGCAAATTT GCCATTGCGA TTACGCTATT GTTTGTCGTG TCTACGTCTT CAGCTTGGGC AGCGTTACCA AGCATTGGTG AATTCACCAG CGATATGACC AAAAAAGATG GTTTAATCCC CGTTTACTAT GACGATGAAA GCGACAAAGT TTACTTGGCC GTGCCTACAA GCGATGCCGA ATATTTGTTC CAAAGCAGTT TGCCTTATGG CGTAGGTTCA AACGATATAG GCCTTGATCG CGGGCAGTTG GGTGATACGC GCTTAGTCAG CTTTGAAAAA TTTGGCAATA AGGTTTTATT AAAGCAGCAC AACACCAAAT ACCGCGCGGC CCACGGCAGC GACGCTGAAA AGCAGAGTAT TGATGAGGCT TTTGCAGACT CGGTCATAGC TGGCTTTACG CTGGTGGCTA AAAACGACAG CGCCAGCCTT ATTGATTATA CGCCTTTCTT GTTAAGTGAT ATTCACGGCA TTGGCAACCG TATGGCGCGC ACCAACCAAG GTAGTTTCAG CGTAGATAAA ATGCGCAGTG GCGTATACTT ACCTAAAACC AAAGGCTTCG AAAAGAATAC TGAATTAGAG GCTTTAGTCA CTTTTGCTGG TAAAAAGCCG GGCGAATACG TGCAGCAAGT TACGCCCGAT CCAGAAAGTG TGACGGTTCA CTTGCATCAC TCGTTTGTGG CACTGCCAGA CGATAACTAC ACACCCAGAG AGTATCACCC ATACTCAGGC TACTGGAAGT TCAGTTATTT CGATTACTCA ACACCTATCA ACGAGCCTAC TGAACAGCGT TTTATTACCC GCCACCGTTT ACACAAGAAA ACACCTCATG CGGCGAAGAG CGAAGCAGTT GAGCCTATTG TGTATTATCT TGACCCAGGT ATTCCAGAGC CGGTAATGAC CGCGCTTAAA GAAGGCGCAA GCTGGTGGAA CCAAGCCTAT GAAGCCGCAG GCTATAAAGA TGCGTTTCAG GTCAAAGTAC TGCCTGAAGG TGCCGACCCT ATGGACGTGC GCTACAACGT GATTAACTGG GTACATCGCG CAACCCGCGG CTGGTCTTAT GGTTCGTCGG TTGTCGACCC ACGTACGGGC GAAATTATCA AAGGTCACGT TACTTTAGGT TCGCTGCGTG TAAGACAAGA CTATTTAATC GCCCTTGGCC TAACCAGCCC GTTTAAAGAG GGTAATACCG ACACCACTGT GCAGCAAGAA ATGGCGCTAG ATCGTATTAG GCAGTTGTCT GCTCATGAAG TAGGGCATAC GTTAGGCATA GCACATAATT TTGCAGCAAG TGAAAACAAC CGTGCGTCTG TGATGGATTA TCCCCACCCC AAAATTAGCA TTAAAAATGG CAAAATAAGC CTGGAAAGCG CTTATGACAA AGGTATAGGC GCATGGGATA TACACGCCGT AGCATATGGT TATCAAGACT TTACCAGCGA CGTAGAAGAA GCCGAAGCCT TGGCAAAGAT TATCGTAAAA GGTCGCAACG AAGGTTTAAG CTTTAAGTCA GACCCAGATA CCCGCAGCAG CCGACATGCA TCAGCAAACG GCCATATGTG GGAAAATGGC AGCAACCCAC TAGATGCTTT CGATGAAATT TCACAAGTGC GCGAACAGGC ATTAGCCAAC TTAGGTTTGG ACACCTTAAG CCCAAGCAGC AGTTTGTCGT CCCTTGAAAA TGCTTTAGTG CCTATTTACT TACTTCACCG TTACCAGTTA GAAGCCGTAG CAAAGCAAGT AGGCGGTTTA GTTTATGAGT ACGAGCGCAA AGGCGACTAT ACCCAGGCGC AGGGCCAGCA GTTTGTAGCA CCCGCGGTGC AGCAACGTGC AATGCAACAG TTACTGACCG CTACTACCGC AGACTATCTC ACTATACCTG AATCGGTACT CACGCTTATT CCACCTACAG CCTACGGTGA CGACATTACT CGCGAGCATT TTAAGGGCAA AATGGGCTTA ATGTTGGACC CTGTTTCTGC CGCTGCTTCG GCATCCAACT TTGCTTTTGA GTTGTTATTA CACCCAGAAC GCTTAAACCG TTTAGAGTGG CAAACAAGAA GCACTAAAGA CCGACGCAAA AAAGTAGGTG TTTCCATGCT TGTGAAGCAG ATACTTAGCG TACACTGGTA TAAAAATAAG TCGCAAAGCC CATTAGCAAA ACGCTTACAG CTAGTAGCGT TAAATGCAGT GATGAAAGCG GTAACTAGCG ATAAGTTGGC GCCCGAAGTA AGAATGGAAG CTGAACTTGC TTTACTTGAA TTTAGCGAAT GGCTAGACGA TAAGGCTGAC GACAATCAGT ATGAAATACT GAAACAGCAG TTTGATACTT ATTGGGCCAG CAAAACATGG CCAAGTACCT TTGAAGTAGA ACCGCTGCCG CCAGGTTCGC CGATTTAG
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Protein sequence | MLQLNIFHKA ARQVKASGKF AIAITLLFVV STSSAWAALP SIGEFTSDMT KKDGLIPVYY DDESDKVYLA VPTSDAEYLF QSSLPYGVGS NDIGLDRGQL GDTRLVSFEK FGNKVLLKQH NTKYRAAHGS DAEKQSIDEA FADSVIAGFT LVAKNDSASL IDYTPFLLSD IHGIGNRMAR TNQGSFSVDK MRSGVYLPKT KGFEKNTELE ALVTFAGKKP GEYVQQVTPD PESVTVHLHH SFVALPDDNY TPREYHPYSG YWKFSYFDYS TPINEPTEQR FITRHRLHKK TPHAAKSEAV EPIVYYLDPG IPEPVMTALK EGASWWNQAY EAAGYKDAFQ VKVLPEGADP MDVRYNVINW VHRATRGWSY GSSVVDPRTG EIIKGHVTLG SLRVRQDYLI ALGLTSPFKE GNTDTTVQQE MALDRIRQLS AHEVGHTLGI AHNFAASENN RASVMDYPHP KISIKNGKIS LESAYDKGIG AWDIHAVAYG YQDFTSDVEE AEALAKIIVK GRNEGLSFKS DPDTRSSRHA SANGHMWENG SNPLDAFDEI SQVREQALAN LGLDTLSPSS SLSSLENALV PIYLLHRYQL EAVAKQVGGL VYEYERKGDY TQAQGQQFVA PAVQQRAMQQ LLTATTADYL TIPESVLTLI PPTAYGDDIT REHFKGKMGL MLDPVSAAAS ASNFAFELLL HPERLNRLEW QTRSTKDRRK KVGVSMLVKQ ILSVHWYKNK SQSPLAKRLQ LVALNAVMKA VTSDKLAPEV RMEAELALLE FSEWLDDKAD DNQYEILKQQ FDTYWASKTW PSTFEVEPLP PGSPI
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