Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01020 |
Symbol | |
ID | 6776343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1072082 |
End bp | 1073404 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642754452 |
Product | metallo-beta-lactamase family protein |
Protein accession | YP_002125328 |
Protein GI | 196155839 |
COG category | [R] General function prediction only |
COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.20709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCTCA ACTTGTACGG CCACAATGGC CGTTGGTTAA TGGTGGACTG CGGTGTATCG TTTGACGAGC CTCTCGTTCC AGCCTATAAA AAGGGCAGCA ATATTGGTTC CACTGAATCT GAAGGCGCAA CACATCGTGT GGTTGCGCCA GACCCTTCCT TTATTGCAAA TCAAAAAGAC GCGTTAGCGG GGATTGTTAT CACTCATGCT CACGAAGATC ACGTGGGCGC TATTCCTTAC TTGTGGGAAA GGTTTAAAAC GCCGATTTAT ACAACGTCAT TTACCGCTGA GGTACTAAGG CGCAAGCTGG CAAGAAGTAA ATTGGCAAAC CGGGTGCCGA TAATAGAAGT AGATGCAGGT GATACCCTTC AAATTGGGCC TTTTAGCGTT AACTGGCTTG CCATTACTCA TTCGTTGCCT GAACCATTTG CCCTTAAAAT TGCGACGCCG GTAGGTACTG TCCTTCATAC CGCAGATTGG AAAATTGATG CTAACCCCAT CACAGGCTTG CCGTTTGATG TAAATCTGTA TAAGCAATTA GGTAGAGAAA ATATTCTCGC CATGGTGGGA GATTCTACTA ATGCCCCCAA ACCTGGCTTT TCTATTTCCG AAAGAAATTG CTACGACGGA TTGCTGAGCA CAATTGCTCC TATAAAAGGT AGGGTGGTGG TAGGTTGTTT CGGCAGTAAT ATTGCGAGGC TTATTTCAAT AGCCAAAGTG GCAAAAAAGA CTAAGCGGTA CATGGCGCTG TATGGCCGTT CGCTTATGAA CATGTACGGT ATTGCGAAGC AACAGGGTAT TTGGCCCGAT GACTTGCCAA TTACCGATCC TCAGCATTTA GGCTACTTAC CTCCTCACGA AGTACTTGCA GTGGCTACAG GTAGTCAAGG GGAGAAAAAT ACCGCGCTGG CACGACTAGC AAAAGACTGC CATCCGCATT TACAGCTGGA AAAAGGAGAT ACCGTATTAT TTTCCTCAAT AGTCATACCG GGCAATGAAG AAAGTGTAGA GCGGTTAAGC AAAGCGTTGG CGGCAAAAGG AGTGGCAGTT ATCCATAGCG AGGATAGCAC ATTGCCAATT CACGCAAGCG GTCACCCTTG TGAAGAAGAG CTCAAACTTA TGTATCACTG GGTCAAGCCT GAGATTGCTA TTCCGGTCCA TGGTGAGCAT TCACACCTTA AGGCTCACGC AGATATTGCG AAAGCGAGTG GTGTTTCAAA ACATTATGTA GGGCAAAACG GCGACTTGTA CCGGTTAGCG CCGCAGCCAA GTATTAGAAG ACAGGTTATC CCGGTGGGCC GGATCCCCGT TCAACAAGAT TAA
|
Protein sequence | MNLNLYGHNG RWLMVDCGVS FDEPLVPAYK KGSNIGSTES EGATHRVVAP DPSFIANQKD ALAGIVITHA HEDHVGAIPY LWERFKTPIY TTSFTAEVLR RKLARSKLAN RVPIIEVDAG DTLQIGPFSV NWLAITHSLP EPFALKIATP VGTVLHTADW KIDANPITGL PFDVNLYKQL GRENILAMVG DSTNAPKPGF SISERNCYDG LLSTIAPIKG RVVVGCFGSN IARLISIAKV AKKTKRYMAL YGRSLMNMYG IAKQQGIWPD DLPITDPQHL GYLPPHEVLA VATGSQGEKN TALARLAKDC HPHLQLEKGD TVLFSSIVIP GNEESVERLS KALAAKGVAV IHSEDSTLPI HASGHPCEEE LKLMYHWVKP EIAIPVHGEH SHLKAHADIA KASGVSKHYV GQNGDLYRLA PQPSIRRQVI PVGRIPVQQD
|
| |