Gene MADE_00908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00908 
Symbol 
ID6776647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp959622 
End bp960296 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content48% 
IMG OID642754340 
Productnitroreductase family protein 
Protein accessionYP_002125216 
Protein GI196155727 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.449557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCTC ACGACCACTC ACCGCTTAAC GACTTTATCG AATACTCTGA ACAAAGCATG 
CTTGCTCGAA GCGCTGAGTT TTTAAACGCT ATGCAGCGCC GACATAGCAT TCGTCTTTTC 
AGTGACAGAC CGGTTGATAA AGCCATTATC GAAAACTGTA TTTTAACGGC GGGCACTGCG 
CCTAGTGGTG CCAACCACCA GCCTTGGCAT TTTTCTGCCA TCCATTCAGC TCCTGTAAAA 
AAACAAATAC GGGAACAAGC TGAAGCTCAT GAACGGGGGT TTTATGATGG GCGCGCTGGG 
CAGCAGTGGT TAGACGATCT CAAACCTTTG GGCACCGATG CCAGCAAACC TTATCTGGAA 
ACTGCGCCTT GGCTAATTGC TGTTTTCAGC CAGAAATTCG GGGAAACAGA AGCAGGAGAT 
AGAAGTCAAA ACTACTATGT CCATGAATCA GTCGGTATTG CAGTGGGCAT GCTTATCACC 
TCGTTGCACA ACGCAGGTCT AGCCACCCTG ACGCATACGC CAAAGCCAAT GAACTTTTTA 
ACCGAAGTGT GCCAGCGCCC TGACAATGAG CGAGCCTATA TGCTAATTGT TGCCGGTTAC 
CCCGCTCACG ATGCCACCGT TCCTAATCAT GCGAAGCAAA AGAAGTCACT CAACGAAATA 
GCTAGTTTTC TTTGA
 
Protein sequence
MQPHDHSPLN DFIEYSEQSM LARSAEFLNA MQRRHSIRLF SDRPVDKAII ENCILTAGTA 
PSGANHQPWH FSAIHSAPVK KQIREQAEAH ERGFYDGRAG QQWLDDLKPL GTDASKPYLE 
TAPWLIAVFS QKFGETEAGD RSQNYYVHES VGIAVGMLIT SLHNAGLATL THTPKPMNFL 
TEVCQRPDNE RAYMLIVAGY PAHDATVPNH AKQKKSLNEI ASFL