Gene MADE_00793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00793 
Symbol 
ID6777051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp836130 
End bp837215 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content47% 
IMG OID642754225 
Productphage-related DNA polymerase 
Protein accessionYP_002125101 
Protein GI196155612 
COG category[L] Replication, recombination and repair 
COG ID[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00479153 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGCGAG AAAACCATGA GTTCCTCCCT ATCTTCGAAG CCCGTGAACG CGCAAAATCA 
AATCAGGCTG TTAGTCGCGC CAAAAAACTC GTGCAAGCCG TTAATGGCCG CCCTAATAAC 
GATAATAAAC TTGTTGTACC TCTGGTTTAT TATGGGGCAC ATACCGGGCG TTACGGCGGT 
AACGAAGGAC TAAACCTCCA AAACCTACAA CGCGGTTCTG AACACCGTAA AGCACTGACA 
GCCCCCTTTG GCCAGCTGGT CTATGTCGCG GACTCATCGA ACATTGAAGC ACGTATCGTT 
GCTTGGTTCG CCCAGGAAAC CGCACTGTTG AATCAATTTA AAAACGGAAT AGACACTTAT 
GCCACTCTTG CAACAGACAT CTACGGATTC CCCGTCACAA AACAAACCCA CCAACTTGAG 
CGTAACGTGG GGAAAGTGGC CCGTCTTGGA CTTCAATACG GGATGGGTGC CCGTACGTTC 
CACAGGACAA TGGAATCGGG CCCAATGGGG ATACCTCCTA TGCCATGGGC TTTCCCCGAA 
ATTGAGAAAA TTGTTAAAAC GTATCGGCGC ACTCACCCAA TGATCAAAAA GTGCTGGGAA 
ATTGGTAACC AAATCATCCA GAAAATGATA CGCAAAGATA CCTTGGAAAC CTGGCGATGT 
CTTACAGTAC GCCATCAGTG CCTAGAACTC CCAAATGGGA TGTATTTGCA GTTCCCGAAC 
TTACGGAACA AAGAAATACA AACAGCCCAA GGGCCGCAGT ATGAAGTGGT TTATGACAGC 
TATGACTATA AGTCTAAAAA GCTCGTTGAA AAACGCTTAT ATGGCGGGAA ACTTCTTGAA 
AATATCGCCC AAGCCTTAGC TGGACTGGCG ATGAAAGAAA TGATGTTGGA CATACAAGAA 
GATCTACGCG CCTATAACGG CCGAGTGGCT CTTCAAGTCC ATGACGAAAT AATTGCAGTT 
GCAGACGGAA GTACCCCTGA TGTCGTGATG CAGATTATGT ATGACAACAT GAATACCTCC 
CCTTCTTGGG CACCGGATTT ACCCCTGGAG TCTGAGGGAG GATACGACAC TTGTTATTCA 
AAATAA
 
Protein sequence
MKRENHEFLP IFEARERAKS NQAVSRAKKL VQAVNGRPNN DNKLVVPLVY YGAHTGRYGG 
NEGLNLQNLQ RGSEHRKALT APFGQLVYVA DSSNIEARIV AWFAQETALL NQFKNGIDTY 
ATLATDIYGF PVTKQTHQLE RNVGKVARLG LQYGMGARTF HRTMESGPMG IPPMPWAFPE 
IEKIVKTYRR THPMIKKCWE IGNQIIQKMI RKDTLETWRC LTVRHQCLEL PNGMYLQFPN 
LRNKEIQTAQ GPQYEVVYDS YDYKSKKLVE KRLYGGKLLE NIAQALAGLA MKEMMLDIQE 
DLRAYNGRVA LQVHDEIIAV ADGSTPDVVM QIMYDNMNTS PSWAPDLPLE SEGGYDTCYS 
K