Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00784 |
Symbol | |
ID | 6776944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 823897 |
End bp | 824658 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642754216 |
Product | putative RNA methyltransferase |
Protein accession | YP_002125092 |
Protein GI | 196155603 |
COG category | [R] General function prediction only |
COG ID | [COG4123] Predicted O-methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCGCT GCAAACAATT TACGGTTGCT CAAGACAAAT GTGCAATGAA AGTGAACACA GACAGCCTTA TTCTAGGAAG CTGGGCTGAG CCTAACTCTG CCCAGCGCAT AGTAGATATA GGAACGGGAA GCGGTATTTT AGCGCTGATG ATGGCGCAAA AAGCCCAAGC TTTGGCCTGC ATTGATGCCA TAGAGATTAA TGAAGGCGCT GCATCACAAG CCGCTTTTAA TTTTCAAAAC GCGAAGTGGT CAAAACAGCT ATTTATACAT CATAGCGATA TCAAGACGTT TGAAGCGCCA TATCAGTACG ATATGATTAT CACAAACCCC CCTTATTTTG ATACGCCACA TCAAGAGACC AAGGCTTATA GCACGCAGCC GGAAAAGCGA AACCTAGCAA GACAAACGTC TTCACTTAAT CCGAATGAAC TTTTTAAGCG AGCCAGTGCA ATGCTTGTTG AGTTAGGAAG TATGTACTGC GTGTACCCAT CTTCTATAGA AGATAATGTC ATTGAGATTG CGCTGTCCTG TGGTTTTGCA TTAAAAAAAA TAATGTATGT AAGGCACTCG TCAGAAAAAG CACCTTACCT TTGTGTGTTT CACTTCACAA AACGTGCTTC AGGTTTAGCG GGTTTAAACC GCCAACATGT CTTGGCATCA ATCGCTGCAG ATAGCAGGCA AACACTCACT ATAAAAGATG AACAGGGCCA ATATACCCAC GAATACAAAG CCCTTTGTCA GCCTTTTTAT TTGAAATTTT AA
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Protein sequence | MFRCKQFTVA QDKCAMKVNT DSLILGSWAE PNSAQRIVDI GTGSGILALM MAQKAQALAC IDAIEINEGA ASQAAFNFQN AKWSKQLFIH HSDIKTFEAP YQYDMIITNP PYFDTPHQET KAYSTQPEKR NLARQTSSLN PNELFKRASA MLVELGSMYC VYPSSIEDNV IEIALSCGFA LKKIMYVRHS SEKAPYLCVF HFTKRASGLA GLNRQHVLAS IAADSRQTLT IKDEQGQYTH EYKALCQPFY LKF
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