Gene MADE_00682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00682 
Symbol 
ID6777135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp710952 
End bp711998 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content48% 
IMG OID642754117 
Productdihydroorotase 
Protein accessionYP_002124994 
Protein GI196155505 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0418] Dihydroorotase 
TIGRFAM ID[TIGR00856] dihydroorotase, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACCC TCACCATTAC TACGCCAGAT GACTGGCACC TTCACTTTCG CGATAACGAA 
ATGCTGGCAG AGACGGTCCC TGCGACTGCG CGTTGTTTTC AGCGCGCTAT TGTTATGCCA
AACCTTGTAC CGCCGGTGGT CAATGCCGAA ATGGCAATGG CTTATAAGTC GCGTATTGAA
GCGGCTCGTC CAAACGGGAG CAGCTTTGAG CCACTTATGA CGCTGTTTCT TACGAATCAA
ACCACGCCGC AGGATATTAT TGATGCAAAA CAGGCAGGCG TTACCGCGTG TAAGCTTTAT
CCAGCAGGCG CCACCACAAA CTCAGATGCC GCTGTAAAAG GTATTCAGGC TTTATACCCT
GTGTTTCAAG CCATGCAAGA ACAAGGCTTG TTGTTACTTA TTCACGGTGA AGTGACCGAA
CATCACATTG ATATTTTTGA CCGTGAGAAA GTGTTTATCG ATACGCATTT AGCGCCTATT
GTTGAGGCAT TCCCGAAGCT GAAAGTGGTG TTTGAGCATA TTACAACGGC TGATGCAGCA
AGCTTTGTGG CGGGTGCGAG CGAATATGTG GGGGCAACCA TTACACCGCA GCATTTGCTT
TTAAATCGCA ACGACTTATT AGTTGGCGGC GTACGCCCGC ACAATTACTG CTTACCTGTG
CTTAAGCGCA ATACCCATCA ACAAGCGCTG CGCGACATGG TGGCAAGCGG CAATAAAAAA
TTCTTTTTAG GTACAGATTC AGCGCCGCAC GCGAAGCACA AAAAAGAGAA TGCTTGCGGA
TGTGCAGGCT GTTACAGCGC ATGGTCGGCC ATTGAGCTTT ATGCCGAAGT GTTTGAGCAA
CTAGGCGCAA TAGATAAGCT AGAAGGTTTT GCGAGCCATT ATGGCGCAGA TTTTTATGGT
TTAGCGCGAA ATACGACTAC AATGACGTTA GTTAAAGAAT CGTGGACAGT GCCTGAACAA
GTAACCTTAG CTGATGGCAC CGATATGGTT CCATTTTTTG CGGGGCAAAC CCTACAGTGG
AAATTAGAAA AGGCATTTCA AGCATAG
 
Protein sequence
MQTLTITTPD DWHLHFRDNE MLAETVPATA RCFQRAIVMP NLVPPVVNAE MAMAYKSRIE 
AARPNGSSFE PLMTLFLTNQ TTPQDIIDAK QAGVTACKLY PAGATTNSDA AVKGIQALYP
VFQAMQEQGL LLLIHGEVTE HHIDIFDREK VFIDTHLAPI VEAFPKLKVV FEHITTADAA
SFVAGASEYV GATITPQHLL LNRNDLLVGG VRPHNYCLPV LKRNTHQQAL RDMVASGNKK
FFLGTDSAPH AKHKKENACG CAGCYSAWSA IELYAEVFEQ LGAIDKLEGF ASHYGADFYG
LARNTTTMTL VKESWTVPEQ VTLADGTDMV PFFAGQTLQW KLEKAFQA