Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00676 |
Symbol | |
ID | 6777309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 704171 |
End bp | 706120 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642754111 |
Product | alpha-amylase, amylosucrase |
Protein accession | YP_002124988 |
Protein GI | 196155499 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.145273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTATG CTGCTGACAG TGGTGTATGT TTAGACCGCA TCTTGGCATC GACCGATTTA TCTGCGCTGA CAAAGAAAGA TGCGGCTACG TTTACGCGAC GTTTGAAGGC CCACTTCCCT CGCCTTTTCG AGAAGTATAC TTTTGTTTAT GGCCATCAGT ACGACTGCTA TTTTCATTTA CAAAAGCTTG TCGAATTATT AAGAGACGGG CTAAAAAGTC GAAAGCCTGC GCTTAAGGCG CTAGACAGTC AGCGTTTAAA AACGCCCTTG TGGTATCGCG ATGAAGAGCA AGTAGGCATG GCCTGTTATG TCGACTTAAT GGGCCCCACG CTAAACGACC TGCATGAGAA AATTCCATAC TTCAAAGCGC TCGGTGTAAC CTACGTACAT CTAATGCCTT TGTACGATGC GCCTAAAGGT GACAGTGATG GCGGCTATGC GGTGTCGGAT TATCGCAAAG TAAACCCAAG TCTCGGTACG GTTAAAGATT TAGAGAAGCT TACCGCGGCC CTTCAAAAAG AAGGGATTAA CGTGGTACTA GATTTTGTGT TTAACCACAC GTCAGACGAA CACGCCTGGG CGAAAGCAGC ACTATCTGGC GATAAGCAGT ATCAAGACTA CTACTACCTG TTCGACGACA GAAGCATCCC CGACCAGTAC GAACACACCT TAAGAGAAAT TTTCCCTCAG GTGAGAAGAG GCAGCTTTAC TTTCAATGAG GCAATGGAAA AGTGGGTGTG GACAACGTTT AACAGCTTTC AATGGGACTT AAATTACAGT AATCCTGAAG TGTTCAATGC CATCACATCG GAAATGCTTT TTCTTGCGAA TTTAGGGTGT GCCGCCTTAC GTTTAGATGC TTTGGCGTTT ATTTGGAAAG AGATGGGCAC TAACTGTGAA AACCAAGAAA AAGCGCACGT GCTTATTCAA GCGTTTAACT GCTGTTTGCA AATTGTAGCA CCGGCCGTGG TATTTAAGTC GGAAGCCATT GTTCATCCCG ACGAGGTACT TAAGTACATT GATAAAGACG AGTGTCAACT GTCCTATAAC CCGTTATTAA TGGCTTTGCT TTGGAACTCG CTGGCAACGC GTAAAACGCG TTTGCTTACA AATTCAATGA AGAAGAGTTT TGCTATTTCA GATGACTGCA CCTGGGTTAA CTATGTGCGT TGTCATGACG ATATTGGATG GACATTCGAT GACGCAGTGG CTAGCGAATT AGGTATAAAC TCCTTTGACC ACCGCTACTT CCTCAATCAG TTTTACACAG GCCGGTTTGA AGGCAGCTTT GCTAACGGTG TGCCTTTCGC AGAAAACCCG TCAAACGGCG ACTGCCGGGT TTGTGGCTCG TTAGCATCGC TATGTGGTTT AGAAGGGGCG ATAGAAGCCA ACGACCCACA GGCTATTGAC GAGGCAGTAA AGCGGATGCT GTTACTTTAC GGTATTACGT TCAGTATTGG TGGTATTCCA TTGCTTTACT CAAGTGATGA AATTGCAAAG CTTAACGATT ACAGCTACCG ACTCGACGAG ACGAAAAGTC ACGATGACAG ATGGGTAAAT CGCATTGCCG TTCATAGCGA AGATACAGCC TTAGCTTTAG GCACAACGAC GCCTGAGAAC GAAGCTCAAA CTGCTAGCCT TCAAGTGTTT GAAGGGCTGA AGCAAATGAT TGCTATACGC AAGCAACATG CTATTTTCGG CCAGTCAAAA ACGCACATAT TAGATACGGA TAATCAACAT TGTTTTGCGT TTTTACGAGA AAATACAGAA GGACAAAAGC TACTTGTCAT CTGTAATTTC AGTGAACATC CACAATCGTT GCACCGCAGC CTTTTGGCAA CACTTAAACA ATCAGCAAGT AAAGACTTGC TAACTGACGA GACCGTTGAT ATGGAGTCTT CACCGCTCGA ACTCGCACCT TATCAACAAA TGTGGTTGCA GCCTGTCTAA
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Protein sequence | MSYAADSGVC LDRILASTDL SALTKKDAAT FTRRLKAHFP RLFEKYTFVY GHQYDCYFHL QKLVELLRDG LKSRKPALKA LDSQRLKTPL WYRDEEQVGM ACYVDLMGPT LNDLHEKIPY FKALGVTYVH LMPLYDAPKG DSDGGYAVSD YRKVNPSLGT VKDLEKLTAA LQKEGINVVL DFVFNHTSDE HAWAKAALSG DKQYQDYYYL FDDRSIPDQY EHTLREIFPQ VRRGSFTFNE AMEKWVWTTF NSFQWDLNYS NPEVFNAITS EMLFLANLGC AALRLDALAF IWKEMGTNCE NQEKAHVLIQ AFNCCLQIVA PAVVFKSEAI VHPDEVLKYI DKDECQLSYN PLLMALLWNS LATRKTRLLT NSMKKSFAIS DDCTWVNYVR CHDDIGWTFD DAVASELGIN SFDHRYFLNQ FYTGRFEGSF ANGVPFAENP SNGDCRVCGS LASLCGLEGA IEANDPQAID EAVKRMLLLY GITFSIGGIP LLYSSDEIAK LNDYSYRLDE TKSHDDRWVN RIAVHSEDTA LALGTTTPEN EAQTASLQVF EGLKQMIAIR KQHAIFGQSK THILDTDNQH CFAFLRENTE GQKLLVICNF SEHPQSLHRS LLATLKQSAS KDLLTDETVD MESSPLELAP YQQMWLQPV
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