| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00674 |
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| Symbol | |
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| ID | 6777327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 701933 |
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| End bp | 702517 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642754109 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_002124986 |
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| Protein GI | 196155497 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.284307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAGG ATAAAGGCGC TACAGTTTTA CAGGCTGATT TTAGCACTGA GGCGGCTATT
GATCGAGCAA TTGATAAGAT TAAGGCAATC AGTAAAACCT ATCGAGGCGT TATACACAAC
GCGTCAGATT GGGCCCAAGA AAAAGACAGT TGCGATAAAC ACAGTTTAAT AGAGCGTATG
ATGATGGTTC ATGCTATTGC GCCCTATCGA ATAAATCTGG CTTTAGAAGC CGCATTATGT
TCATGCGAAG GCCAAGCCGA CATTATTCAT ATGACCGACT ATGTGCAAGA AACCGGCAGC
GAAAAGCATA TGGCCTATGC CGCTAGCAAA GCCGCACTGC ATAACCTTAC CCTTTCATTT
GCGAAAAAAT TAGCACCGCA GGTGAAAGTT AACAGTATCG CTCCCGCTCT GCTCATGTTC
AATGAAGGCG ATGACGACGC CTACAAGGAA AAAGCGCTGA AAAAATCACT GCTTGAAATA
GTACCCGGCG CGAAAGAGGC GGTGAAAGCC ATGAACTACT TGTTCGACAG TGACTATATA
ACGGGGCAGA CGCTACACCT AAACGGTGGC AGGCATTTAA AATAA
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| Protein sequence | MLEDKGATVL QADFSTEAAI DRAIDKIKAI SKTYRGVIHN ASDWAQEKDS CDKHSLIERM
MMVHAIAPYR INLALEAALC SCEGQADIIH MTDYVQETGS EKHMAYAASK AALHNLTLSF
AKKLAPQVKV NSIAPALLMF NEGDDDAYKE KALKKSLLEI VPGAKEAVKA MNYLFDSDYI
TGQTLHLNGG RHLK
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