Gene MADE_00608 details

Gene Information

• Locus tag: MADE_00608
• ID: 6775362
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: +
• Start bp: 642281
• End bp: 642703
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 642754043
• Product: hypothetical protein
• Protein accession: YP_002124920
• Protein GI: 196155431
• COG category: [R] General function prediction only
• COG ID: [COG1569] Predicted nucleic acid-binding protein, contains PIN domain
• TIGRFAM ID: [TIGR00305] probable toxin-antitoxin system toxin component, PIN family

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG TAGTTATTGA CACCAGTGTA CTTATCAGCG CCCTGATTGG CAAAACAGGG 
CCAGCTCGAG AAGTGATACG GCAATGCTTG TTGGGTAGGT TAAAGCCGCT GATTAGCACG 
ACCTTATTTT TGGAATACGA AACAGTAAGT AAGCGAGACA AAATCAAAGA GTTGTGCCCG 
CTTACCGAGG ACGAAGTGAG CAATTTATTA GCAGCATTTT TTAGTGTTTG CGAATGGGTG 
CAGATACATT ATTTGTGGCG ACCAAATTTA AAAGACGAAG GCGATAATTT TCTCATTGAA 
CTTGCAGTAG CAGGAAATGC TGAGAGCATT ATTACGAATA ACCTAAAAGA TCTGCGAAAT 
GCGGAATTAC AATTTGAAGG TTTGAAAGTG TTAGCGCCAG AAGATTATTT GAGAGGAGTT 
TAA 

 

Protein sequence

MKKVVIDTSV LISALIGKTG PAREVIRQCL LGRLKPLIST TLFLEYETVS KRDKIKELCP 
LTEDEVSNLL AAFFSVCEWV QIHYLWRPNL KDEGDNFLIE LAVAGNAESI ITNNLKDLRN 
AELQFEGLKV LAPEDYLRGV