Gene MADE_00583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00583 
Symbol 
ID6777124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp618096 
End bp619286 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content45% 
IMG OID642754018 
Producthypothetical protein 
Protein accessionYP_002124895 
Protein GI196155406 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAATGA CCATGGCATA TCAGCAATTT TACTCAGGTT TTCTTAACGC GAACAAAAAC 
AAACAACATT ATGCTTGTCA CAGTCATTAT TTTTGGCCTG ACTGCACACG CGACGCAATG
CTAGCGTACT GGGATGATAG CGCTAAATAC GTAGATGCAA AGTGGGGATA TTTTTTTGAA
ACTCTAGTGC CAGAATTGCA GCAGCGCATA AGTCGTATTC TTAATACCGG CGCGCCTCAG
CAAATTGTAT TTGCGCCCAA TACGCACGAG TTGCTCTATC GAATAATGAG TTGTATTGAT
AGTCGTACTC CATACAAAGT GGTCTCAACA GACAGTGAAT TTCACAGCTT TCAACGTCAA
GCTAGCCGAA TGCAAGAGCA AGGTTTGATA GAGTTAGTGA CGGTTCCGAC TAAACCTTAT
GCTACGTTTA CTTCACGCTT TAAAGCTGCC ATAGCCGAGC ACAATCCCGA AATTGTCTTT
TTTAGTCAGG TTTTCTTTAA CTCTGGATAT GTGGTGGATG ATGTTTCAGG CATTGTGAAT
AGCGTTTTAA ATGACAACAC CATCATAGTG GTCGATGGCT ACCATGGCTT CATGGCGAAG
CCTACTGACT TGGCTGACAT CGCGCATCGT GCCTTTTATT TGTCCGGCAG TTATAAGTAT
GCACAGGCGG GAGAAGGCGC CTGCTTTGCT CATGTGCCTA TTGTGTGTAA TTTAAGGCCC
GTTTACACAG GCTGGTTCGC TGAGTTTGGT GAACTGGACA AGCCTCGTAA CACTGGGGGG
CAAGAAAGCG TGCAGTACAG TGTAGATGGA ATGCGTTTCG CCGGCGCAAC CATGGACTTC
ACGTCATTAT ATAGGCTGAG AGCCGTGCTT CGCATGTTTG AAGAAAACGA TATCAGCGTT
GAGACAATTG ACACCTATGT GATGGCAATG CAGCGTGCGT TTTTAGATAA ACTTGCAGCG
TGTAATCACC CGTTGCTTAA CGAGCAGCAT TTAGCCGTTA GCGATGCATC TAACAGGGGA
CATTTTCTTA CTTTTGAACT CGATGACGCT AACATTACAA AGGCGCTGGC ATTAACGCTT
AAAGCTAACG ATATTCTTAC CGACTATCGC GGTAACCGTT TACGGTTTGG CTTTGGCCTT
TACCACACTA GCGACTATAT CGATTTGTCC GCCCTATCAA AAATGGCATA A
 
Protein sequence
MVMTMAYQQF YSGFLNANKN KQHYACHSHY FWPDCTRDAM LAYWDDSAKY VDAKWGYFFE 
TLVPELQQRI SRILNTGAPQ QIVFAPNTHE LLYRIMSCID SRTPYKVVST DSEFHSFQRQ
ASRMQEQGLI ELVTVPTKPY ATFTSRFKAA IAEHNPEIVF FSQVFFNSGY VVDDVSGIVN
SVLNDNTIIV VDGYHGFMAK PTDLADIAHR AFYLSGSYKY AQAGEGACFA HVPIVCNLRP
VYTGWFAEFG ELDKPRNTGG QESVQYSVDG MRFAGATMDF TSLYRLRAVL RMFEENDISV
ETIDTYVMAM QRAFLDKLAA CNHPLLNEQH LAVSDASNRG HFLTFELDDA NITKALALTL
KANDILTDYR GNRLRFGFGL YHTSDYIDLS ALSKMA