| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00547 |
|---|
| Symbol | |
|---|
| ID | 6777920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 578326 |
|---|
| End bp | 579015 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642753979 |
|---|
| Product | glycerophosphoryl diester phosphodiesterase family protein |
|---|
| Protein accession | YP_002124859 |
|---|
| Protein GI | 196155370 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.606311 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCATTT TTGCACACCG CGGTGCCAGC AAAGCAGCAC CTGAAAATAC ACTTAAAGCC
TTTAGGTTAG CGTTTGAGCA ACATGCAGAT GGTATTGAGT TCGACACTTA TCAGCACGAT
GACGGCATTG TAGTTTTCCA CGACAGGACC CTTAAACGTC GTGCTCGCGA GCCGGGTTAC
CTGTTAGATG CATCGTGGCA AGCGCTTCGA GAAATGGACA TAGGCGAAGG TGAGCGCATA
CCAACCCTTT CTGAAACCCT AAATTGTGTT GTTGATAATA AGTGGTGCAA TATCGAAATT
AAACACTTAA ACGATGTCGA TAGCTGGGTT GAAGACGTAA AGCAGGCTGT GCAAGAAAGC
GGTATTAACG TTGATAAGCT GCTTATATCC TCATTTAATC ACCATTGGCT TCATGCAATC
GCAAAGCGCT GGTCAAAGGT TAAGATTGGA GCGCTCTCGG CAAGTTACGA ACTAGACTGT
ACTGCCAGCG CCCGAGCACT TAACGCCTAT TCGGTTAATA TTGCCTTAGA TGCTGTTGAT
AAGAGCTTTG TACACGAGGC CCTACGCGAT GGGTTTGACG TATTTGTATA TACCGTTGAT
GAACCAAGGG ATATGCTAAT GCTACGAGAA TGGGGGGTTA CAGGTATCTT TACTAACGTG
CCCGATACAG CCCTTAAGGC ACTGTCTTAA
|
|---|
| Protein sequence | MLIFAHRGAS KAAPENTLKA FRLAFEQHAD GIEFDTYQHD DGIVVFHDRT LKRRAREPGY
LLDASWQALR EMDIGEGERI PTLSETLNCV VDNKWCNIEI KHLNDVDSWV EDVKQAVQES
GINVDKLLIS SFNHHWLHAI AKRWSKVKIG ALSASYELDC TASARALNAY SVNIALDAVD
KSFVHEALRD GFDVFVYTVD EPRDMLMLRE WGVTGIFTNV PDTALKALS
|
|---|
| |