Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00490 |
Symbol | |
ID | 6777567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 517756 |
End bp | 520884 |
Gene Length | 3129 bp |
Protein Length | 1042 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642753922 |
Product | sensor protein BarA |
Protein accession | YP_002124802 |
Protein GI | 196155313 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATCT TTCGCGTATT CTTTTTTCTT TTCTTTTTTT TAGCTAGCGG CTTAGCCTCC ACTGCTTATG CTCAGCATAT CGAGCAACTT TTCGATGAAG AAAGTACGCT AGACTTGTCT GATTCACTGT ATTTTTTATT TGAAACCGAC TACCAACTTA CCATTAGCGA TGTATCGAGG CGCCGAAACG ACTTTTTGAT GCATCCCCAC GACAATCCTA ACTTTGGCTT TCGCAACAAC GGTATGTGGT TGCTTACCTC TGTAGCCAAT GTATCAAATG AAGAAGATTG GGTATTTACA ATTAACTTCA GTCAACTAGA TAGCGTTGAC TTTTATTTGG TTAAAAACGG TAAAGTCATA AAACAAAGTC ACCAGGGAAA AGCGCAAAAA GAGCAGCGTT TTCGCGTCCC GACCTTTCGT ATTGAACTGT CTGATAGCGA CGCCGTCGAC CTATACATCC GCATTGAAAG CCGCTCATCT AGCTTAATCG CACCACTTCG CATTCAGGCA GAGCCTATTC ACAGCAGCTA TTTCCAAGCC GACAGTATGC TGTGGGGCTT TTTTTATGGA GGGTTACTTA TCCTCGCCAT CTCCAATTTA GCCCTCTTCT TTGGTGTTCG AGAGAAAAGC CTGATTGCTT ATGTGGGTTA TATTGGTGCG GTGCTTTTAT GGCAGTTTGT GTGGGGCGGT CATATCCAGC TTGTATTTAG CCAAGGAATT CCCTCTTGGC TAGTCGGTCA TTCCGAGCTT ATCTTTGTGA TTATTGGTAT CAGTTCTGGG GTCTTTACCA TGACATTTTT GGAGACGAAT AGGCATTCCC CTACTGCGCA CCCCATTATT AAATTGCTAT TGATTTGCCA AGGGCTAACC GGCCTTATTT GCTTCGTTGA CCTACTGCCT TCAATTTGGA AAAACAATTT AGTGTATGGC GTTGGGCTTG TTGCCATTTT AAGCTATATC TATGCGGGCT TTGAAGCCTT CTTTAATAAC TTCAAACCGG CCCGGTACTT CATCTTCGCA TGGGGTATGC TTGCCACCGG CGCTATCGTG GGAATGCTAA GCCTTATCGG TGTACTCCCT TCCAACGACT TTACCACTTA CTGTTTCCAA GTAGGGGTAT TCCTTGAAGC CGGCCTCTTC TCGTTCGCCC TTATGGAAAA GAGCAGAAGC CAGCTTGAAA GCGAAGTCGA ACAGGCCACC AACGATCTGC GCAACAATGT TGAGCTTATT GAAGAACAAA ATGCCCGCTT AGATATTGCG CGAAAAGACG CGATCAAAGC CAGTAATGTT AAGTCTCAGT TCCTTGCCAA CATGAGCCAT GAGATTCGCA CGCCCCTCAA TGCCATTTTA GGCTTCAGCA AAGAATTGAA TAATGCTTCA CTGCCCACGG ATCAGCAAGA GCAAGTAAGA ATAGTAAATA CCGCCGCCGA TAACCTGCTC ACTATCGTCA ATGACGTATT AGATTTTTCC AAGATTGAAG CGGGTAAGTT AACCATTAAT AACCAGCCTT TCTCCCCTAA CAAACTGCTA GAAGAAATGG TCACCATTAT GGCGAAGTCT TCTCACAGTA AACACCTTGA GTTTGTTTTT GATTTACATC CGCTGCCTGA AAAACTCATT GGCGACGTGT TTCGCATCAA GCAGGTGCTG AACAATTTGC TAAGCAATGC CTTAAAATTC ACATCAAGCG GTACCATAAC CTTTTCAGTG AGAGGCCGCG CACTACCCCA CGGTATCCAC GAAGTGAATA TGACTATCGA AGATACGGGC ATAGGCATTA GCCGCCAAGA TAGAAAGAAG CTGTTTAACG CGTTTTCGCA AGTTGATGAT GCCTTGAATC GCAACTACCA AGGTACGGGG TTAGGGCTGG TTATTAGCAG GGAACTAGTG CGCTTAATGA ACGGCGACTT AACCCTTAAA AGCGCACTTG GCCAAGGCTC AACGTTTATC GTTTCTCTTC GTATGACCCA GTTAAGTCAA AAATACGCAC TAAGCAGCAA TGAAGACTGG CTAGGCAAAA AAGTGGTTAT CTTTGACCCC GTGCCTGCAA CGCGTCGTGC AAGCGCTAAC ATGTTGTCTA TCTTGGGGGC GCAGGTAATC TCGGTAGAAT CGCTAGATTA CTTGGCTACA CTTACTGGTC AATATGATTT CTTTATGGCC GCCGTGCCCG TAAGCAAAAT GAGCTTGCGA GATGCATACC TTAGCCGTTT TGTTCAGTTC CCCGCGCAAA AACGCATTCT TTGGTACTCG GGTCCAGAGC CATTCGCTCA ATACCCTAGC CTCTCGCAAC ACTTCCATTC ACAAGTGCGC ATGCCAATGA CGTTAACTAA ACTCGATAGT TTGGTTCATT GTAAAGTGAC ACCGGCTAAA AATGCGATGA TTGAGAAAAT TGAAAGCTTG CCCAAAGTGA AGGTCTTAGC CGTTGACGAT ATGGAAATGA ACCTTAAGCT CCTACATACT TGGCTTGACC ACTCCCCTAT TGAGCTGATT ACTACCATCA ATGGGCAAGA CGCAGTAAAT CAGTGCCAAA TACAAGAATT TGACCTTATC TTAATGGACG TGCAAATGCC GGGTATGGAT GGCGTGCAGG CCACCAGAGA AATTAGAAAA TCGCCATTAA ATATGGGCAC CCCTATTGTG GCAGTAACCG CCCATGCGTT CAAAGAAGAG CAAGACCGAC TGCTGGCATC AGGAATGGAT GACTACTTGC CTAAGCCCAT AGAAGTTGAC CTGCTGATCA CCTTAATTAA ATCGTGGTGC CACAGTATTG AGCCGGGAGA GATTGTATTC CCTTCTATCG ACTGGCAGCT TGCCTTAAAG CGTGCCAATC AGAATCAGGA TACGGCTAAA GAGATGCTTG ATAGCTTTAT TGCGCAGCTT CCAGAGACGA TCGATACCCT TTCAGCACTA TGGAACGCAA AAGATTACAA CGCGCTTAAA GCAGAGGTGC ATAAGCTTCA CGGCGCGTGT TGCTACACGG GTCTACCAAG AATGCAACAT TTGGCCAATG AAACTGAGAG CGCGCTTAAA TTAGGACAAC ATGCCATGGT CGATGAACAT TTACCAGCCC TACTCGAAGA AGCCAAAAAG GTGATAAGAG AAAGCATCAA CCATAATGGC ACGTTCTAA
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Protein sequence | MAIFRVFFFL FFFLASGLAS TAYAQHIEQL FDEESTLDLS DSLYFLFETD YQLTISDVSR RRNDFLMHPH DNPNFGFRNN GMWLLTSVAN VSNEEDWVFT INFSQLDSVD FYLVKNGKVI KQSHQGKAQK EQRFRVPTFR IELSDSDAVD LYIRIESRSS SLIAPLRIQA EPIHSSYFQA DSMLWGFFYG GLLILAISNL ALFFGVREKS LIAYVGYIGA VLLWQFVWGG HIQLVFSQGI PSWLVGHSEL IFVIIGISSG VFTMTFLETN RHSPTAHPII KLLLICQGLT GLICFVDLLP SIWKNNLVYG VGLVAILSYI YAGFEAFFNN FKPARYFIFA WGMLATGAIV GMLSLIGVLP SNDFTTYCFQ VGVFLEAGLF SFALMEKSRS QLESEVEQAT NDLRNNVELI EEQNARLDIA RKDAIKASNV KSQFLANMSH EIRTPLNAIL GFSKELNNAS LPTDQQEQVR IVNTAADNLL TIVNDVLDFS KIEAGKLTIN NQPFSPNKLL EEMVTIMAKS SHSKHLEFVF DLHPLPEKLI GDVFRIKQVL NNLLSNALKF TSSGTITFSV RGRALPHGIH EVNMTIEDTG IGISRQDRKK LFNAFSQVDD ALNRNYQGTG LGLVISRELV RLMNGDLTLK SALGQGSTFI VSLRMTQLSQ KYALSSNEDW LGKKVVIFDP VPATRRASAN MLSILGAQVI SVESLDYLAT LTGQYDFFMA AVPVSKMSLR DAYLSRFVQF PAQKRILWYS GPEPFAQYPS LSQHFHSQVR MPMTLTKLDS LVHCKVTPAK NAMIEKIESL PKVKVLAVDD MEMNLKLLHT WLDHSPIELI TTINGQDAVN QCQIQEFDLI LMDVQMPGMD GVQATREIRK SPLNMGTPIV AVTAHAFKEE QDRLLASGMD DYLPKPIEVD LLITLIKSWC HSIEPGEIVF PSIDWQLALK RANQNQDTAK EMLDSFIAQL PETIDTLSAL WNAKDYNALK AEVHKLHGAC CYTGLPRMQH LANETESALK LGQHAMVDEH LPALLEEAKK VIRESINHNG TF
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