| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00488 |
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| Symbol | |
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| ID | 6777516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 513732 |
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| End bp | 516878 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642753920 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_002124800 |
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| Protein GI | 196155311 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCT TCAACTTTGA TAAAGACAAA TCGTACCCGT GGTACACGCT TTTTTACCGC
CGAGGACACC TGTTGGTGTT AAGCCTGCTT ATTCTTATAA CCGCTGGCCT TTCCGCCTTA
GGCTCACTTC CACGTATAGA AGATCCACGA ATAGATACCC GAAATGCACT TATCATAACG
CAATATCCAG GTGCTTCAGC TGAACGAGTA GAAGCCTTAG TGAGTGACGT ACTTGAAGAT
AGGCTAAGGG AAATCTCCGA AATTAAGGAA GTAAAGTCTA CCTCTCGCGC AGGTATTTCA
ATCATTTTAA TTGAAACGCA AGACTGGATT AACAATACCA GTAACGAGCA ACTTTTCAGT
GAAATTCGCG ATGCGATTGG GGCGGCAGCG GAATTATTCC CGGAAGGTGC AATGGCGCCT
ATCTTCGATG AAAAGCGCGG GGCTACCGCA TTCACCTTAC TGCTTTCTGT TCGCGCCGAA
CACTTTGAAA ATACACCTAT TACGCTAACC GCCCGCCTAG CCCAAGAGCT CACCGACAGG
CTGCGTAACG TAAGTGGAAC CGAATTGGTT CGCGTCTATG GCGCGCCTGA AGAGGAAATA
AGCGTTAATA TCGACCCAAT TAAACTTGCA GCCACCGGCC TCAACCTGCA GCAGGTCAGT
GCGTTAATTC GTCGCGCCGA CCCTAAGCTT CCCGCAGGCA TGCTAAACAC ACAACAAAGC
AATTTGCGTT TTACCGTGGG TGAGGGACTT AACGGCGTAA ATATGATTGC TTCAATTCCT
TTGGTTAACC AGCAAGGCCG CTATTTACGT GTCGAAGACG TTGCTACGGT AGAGCGAGGC
TACAAAACGC CACGCAATGA AGTGGCCTTT TTAAACGGTG AAGAATCAAT TTTTGTTGCA
GCGCGAATGC AGCCTTCTCT TCGCTCGGAT GTATGGACAA AAAACGCGCT AGCGGTGGTG
GAGCAGTTTA ACCGGGATTT TAGTGGTACT TTAACGGCCA CTGTGGCGTT TGAGCAAAAT
GAGTACACCG CCACTCGCCT AGCCGACTTA TCTATGAATC TGTTGATGGG TTGTGCAGTA
GTTATGCTGG TTATTTTGCT TTTCATGGGC TTTCGCGCTG CGTGGATTGT GGGGCTTGCA
TTACCTTTGT GCGCGGCGTT TGCGCTATTT TCGTTAAGTT TTTACAACGA GCAAATTCAC
CAGATGTCTA TTTTCGGCAT GATCATCGCC ATCGGCTTGC TTATAGACAA CGCGATTGTT
ATCACCGACG AGATACGCAT TAATTTGCAA GATTCGAATT TAACGCGGGT TGGGGCTATG
GCGAAAAGTG TGTCTCACTT ATTTGCTCCC CTTTTAGCGT CAACCCTTAC CACTATCTTG
GGCTTTATGC CTATCTTTTT GCTAGACGGA AACATCGGTG ATTTCGTAGG GCCAATTGCG
ATAAGCGTGG TCATGGCGTT AATTGGTTCG CTGTTCATTT CCCTTACGAT AATTGCTGCG
CTTGCCGCCC GTTTCTTACC AAAAAACGAT GGTGAATCTG CACAGGGTAT GGCGTCGCAA
TCATGGTGGA AAGTGGGCCT TCAAGCACCG AATCTCAGTC TTGCGTTTAA ACGGCAGCTT
GGCCGATGGA TTAAACAGCC TGTTTTAGTG CTGTCTGTTA TCGCAGTGCT TTGCTTGTCG
GGGTTCGTGC TATCGGGAAC CTTAGCCAAC GTGTTCTTCC CTAGTGCAGA CAGAGATCAG
TTTGAAGTGT ATTTGTGGAC GAAAGAGGGA AGCAGTCTCG ACAATACCAC CGCCTACGTT
AAAAAAATTG ATAGCGCGAT ACGCGCAGAG CAAAGTGTAA AGCAAGTAAG TTGGCTGGTG
GGCGGCTCGG CCCCTTCAGT GTATTACAAT CAAATGATGA CCCGCGATAA CATGCCGTAT
TTTGCTAATG CGGTGGTATC GACTGATACC GTAGAAGATG CGGTCAACCT TGTAGGCAAG
TTACAGCGAG ACCTTGATAT TGCCTATCCG AAAGTACAAA TTGTTGTTCG CGCCTTTGGT
CAAGGCCCGC CTATAGCGGC GCCGGTGGAA GTAGAGATCT TTGGCCCAGA CCTTAACATC
CTAAACGACC TAGGGGATAA GGTGCGCATG TTAATGTCAC AAGTAGACGG TATTTCCCAG
TCAACTGCCA GTATCTCTAT GGGCGAGCCA GAATTAAAAA TTAACGCTGA TAGCGACAAC
TTATCGTATT TAGGTTTGAC TCTGTCTGAA CTTGCCAATC AAATGCAGAT TAACTTTTCG
GGAATAACTG GCGGCTCGGT GTTAGAAAGC ACAGAAGAGA TCCCTGTTCG CGTTAGGCTT
GATGAGGCAT TTAGGCAAAA TGTAACGGGC GTCGATGCGA TGCCTATTCC AGTGGCCGGT
AACAACGCTA TTTCTTGGTC GCCGCTTGCC GCCGTGACGC ATTTGTCGCT ACAGCCTGCT
ACTAGCAGTA TTACCCGGGT CGATGGAGAG AGGCTAAATA GAATTCAGGC ATTTTTATTA
CCCGGCGTAC CGGCCATAGA TGCCAGTAAT CATTTGCGTG ACTTGTTAGA AAGCCGTCTC
ATTCTGCCCG AGGGCTATCG AATTCACTTA GCGGGAGATG CCGACGAGCA ACAGCAGGCG
CTAGGTAAGC TTGCCACCTA TGCTCCGGTG CTATTGGTGT TGATGGTAAC CACGTTAATC
TTAACGTTTA CCAGTCTTCG TTTGGCTGGC GTTATTGGCC TAGTGGCCAT ACTGTCGGTG
GGGTTGGGTA TGTTTAGCTT ATGGATTTCT GGTTTACCCG TAGGCTTCAA TCCGCTACTT
GGCTGCGCCG GGCTTATTGG TGTTGCTATT AATGGGTCTA TCGTGGTGAT TGCCGCGATA
AACGCCAACC CAAAAGCGAA GCAGGGCGAC ACTAAAGCTA TTGTTGAAGA AACCATGAGC
TGCAGCCGTC ATATTCTGTC GACAACCTTT ACCACGGTGG GGGGCTTAAT TCCTTTATTA
CTCTTTAGCG AAGGGAGCTT CTGGCCGCCG TTGGCAGTGG TGCTGGCAGG GGGCGTTGGG
TTCTCTGTGA TATTGTCGTT AGTTTTTACC CCTACCATAG TGGCGGCGTT TCAAAGATAT
CGATATAGAA ATCACACATT GGCATAA
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| Protein sequence | MKTFNFDKDK SYPWYTLFYR RGHLLVLSLL ILITAGLSAL GSLPRIEDPR IDTRNALIIT
QYPGASAERV EALVSDVLED RLREISEIKE VKSTSRAGIS IILIETQDWI NNTSNEQLFS
EIRDAIGAAA ELFPEGAMAP IFDEKRGATA FTLLLSVRAE HFENTPITLT ARLAQELTDR
LRNVSGTELV RVYGAPEEEI SVNIDPIKLA ATGLNLQQVS ALIRRADPKL PAGMLNTQQS
NLRFTVGEGL NGVNMIASIP LVNQQGRYLR VEDVATVERG YKTPRNEVAF LNGEESIFVA
ARMQPSLRSD VWTKNALAVV EQFNRDFSGT LTATVAFEQN EYTATRLADL SMNLLMGCAV
VMLVILLFMG FRAAWIVGLA LPLCAAFALF SLSFYNEQIH QMSIFGMIIA IGLLIDNAIV
ITDEIRINLQ DSNLTRVGAM AKSVSHLFAP LLASTLTTIL GFMPIFLLDG NIGDFVGPIA
ISVVMALIGS LFISLTIIAA LAARFLPKND GESAQGMASQ SWWKVGLQAP NLSLAFKRQL
GRWIKQPVLV LSVIAVLCLS GFVLSGTLAN VFFPSADRDQ FEVYLWTKEG SSLDNTTAYV
KKIDSAIRAE QSVKQVSWLV GGSAPSVYYN QMMTRDNMPY FANAVVSTDT VEDAVNLVGK
LQRDLDIAYP KVQIVVRAFG QGPPIAAPVE VEIFGPDLNI LNDLGDKVRM LMSQVDGISQ
STASISMGEP ELKINADSDN LSYLGLTLSE LANQMQINFS GITGGSVLES TEEIPVRVRL
DEAFRQNVTG VDAMPIPVAG NNAISWSPLA AVTHLSLQPA TSSITRVDGE RLNRIQAFLL
PGVPAIDASN HLRDLLESRL ILPEGYRIHL AGDADEQQQA LGKLATYAPV LLVLMVTTLI
LTFTSLRLAG VIGLVAILSV GLGMFSLWIS GLPVGFNPLL GCAGLIGVAI NGSIVVIAAI
NANPKAKQGD TKAIVEETMS CSRHILSTTF TTVGGLIPLL LFSEGSFWPP LAVVLAGGVG
FSVILSLVFT PTIVAAFQRY RYRNHTLA
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