| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00470 |
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| Symbol | |
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| ID | 6777702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 492587 |
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| End bp | 495271 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642753902 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_002124782 |
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| Protein GI | 196155293 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACAGC CGTTTTCTCA TTTACCTGCT TATGAGCTTG TTACACCGCT TAAAGAGTCG
GTTGCCGCTA ACAATATCAT TATTGGCGCG CCACCGGGCG CGGGAAAGTC TACCGTACTT
CCTTTGTCAC TGCTGCAATC ATCACTTAAG GGTAAAATAT TGCTTATGCA GCCACGTCGC
GTGGTGGTGA GAAACCTCGC TGACTATTTA GCTAAGCAGT TAAACGAAAG TGTGGGTGAA
ACGGTGGGGT ATCGTATTAA AGGCGAATCA AAAACATCGC CAGCCACTCG CCTTGAGATT
ATTACAGAAG GTGTGCTGAC TCGCATGATT CAGCAAGACC CAGAGCTAGC AGATGTCACT
GCTATTGTCT TCGACGAATT TCACGAACGC AGCATTCACA GCGATTTTGG TTTGGCGCTA
GCGCTTGAGG TTCAAACTGG GCTTCGCGAC GACCTGCGCT TAATTGTGAT GTCGGCTACC
TTGGATATAG CGCCACTTCA AGCACTGCTT AATGAATTTA GCGCGCTGCC CGTGGTGAAC
TTAAATACAC AAGGACGCGT GTTTCCCGTG GATATTCGCT ACACCCGAGA TGTGCAGGCT
TATGAGTTAG TACCGAAAAC TTGCAATATC ATAAAGCAAG CAGTAAGCGA ACACGATGGC
GATATCTTGG TATTTCTTCC TGGTCGGGGG AGCATAAATG CTGTTGCCAG AGAAATAAAA
GGGTTAGCTG AGAGTGCGGA CATTGCTATT CACATGCTTT ATGGCGCACT AAGCAAGTCT
GCGCAGCAAG ACGCTATAGC CCCAGACCCC CACGGGCGAA GGAAAGTTAT CCTCTCTACT
AATATTGCTG AAACCAGTTT AACCATTGAA GGCGTGACAG TAGTTATTGA TAGTCTGTGG
GAGAACAGTG CGCAATATCA CCCTTCAAGC GATATTACTG CGCTCACCCA GCAACGTATT
TCGCAAGCTT CTGCCACTCA AAGAGCAGGG CGAGCAGGGC GAGTAATGGC GGGTATCTGC
TATAGGCTAT GCAGTAAAAG CAGCTTCGAG CGATTAGCCA AACACAATGC GGCGCAAATA
GAAAAAGAAG ATTTAAGTAG CTTTCTACTT GATACGTATG CGTGGGGCAG TACGCCCGAT
ACATTAGCAC TTTTAACCAA GCCCACACCT GCTCAACTAA ACTCGGCACA GCAAAAGCTC
CACCGATTAC ATGCAGTAGG GTTTGATGAC GCAACAGGGC AAGGGAGCAT AACGCCCTAC
GGACGTCAGG TAGCGCAATT GCCATGTCAG CCGCATTTAG CCCATTTGCT GTTAACAGTG
AAGTCAGGTA TTGAAGGCCT TTCACCTAAA GAAAATAACG CGTTAAAACA TGCCGCAGTA
TTTGTGGTGG CGTTAAGTGA AAGCAATATG AGTGCAAGTG GGGCAACAAG TGTAGTGGAC
GCTTTGCTTC AGGTCAGTGG CAACGCGCGT AATCAGTTGA TTCAGCAAGC CTCTCGCTAC
GTTCGGTATG TAACTAGCTC TACAGAACGC GAGCAATCGT TTAAGGCTGA TATTAACGCG
CTAGAAGAAT GGGCTCTTGG TTTGTGTATA GCTATAGCAT TCCCACTGCA GGTGGGCTAT
TTGCGTGTAC GCGCGACGTC AGGCAATAAT GCCTCGGGCA GCGGAGCCTG TAGTAAAAAT
GCGACGGCAG GCGTAAAACA GTCATCACAA TTGCTTGAGT ATAAGCTTGC CAGCGGGAAA
GGCGCCGAGC TTGCTACTTC TAATAGCAGT GCATTTAATC ATGGCGATGC CGATGACAGT
TCGCCGTGGT TAGCGGTACT TGAAGGGCAA CTTATAAAAA ATACGGTAGT GATACGGCTA
GCGCAAGCTG TGCCCGAAAG TTACTTGCGC TTAGCTTTCC CCAAAGCATT TAGTGAAAAA
CGAAGCGCAG TGCTTAATCG CGACACCGGT CAGATGGAAG CGCGCCGAAG CACAGGTTTT
TTTGCTATCA CATTAAATAG TGTGCCGGTC TCAGGGCAAG AGAAAATCCG CGATAATGAA
TACTGGGATG GGGCGGTAAC CGAAGGATGG TTTGCCTACC TAGATGCACT GCCACTTTCA
CAGTGGCCCC TTTGCGACGC TGACTGGCAG TGGTGGCGAA GAGTGGCATT GGCTGGCAAG
CTAAATCTAC AGCAAGACAA AGCGTTTGAT AAGCCAGATG CGTGGCCTGC ATCGTTGAGC
GAGCTGGTAC ACAAGGCAAA AGAGAGCTTA AGCGCAGCGC TAAAAAGCTG CAAAAACATA
AAGTCGCTAC AGCAGCTGCC GTGGAAAACG GCGCTGAACA ATGGACTTTC TTGGCCACAG
CAAGACGCCT TAGCAACACA TCTTCCCACC CACGTGTCTA TTCCTACGGG GCGAGAAGCC
GCACTGGACT ATCGTGAAAG CGGTGATGTG GTGCTGGCGG TTAAAATGCC AGAAATGTAC
TCGCAAAATG GGCCGCTAAC GATAGCTGGA GGCCGCGTTA CCGTGGTGTG CGAGTTGTTG
TCGCCAGCGG GAAGGCCACT GCAAACTACC AGTGATTTAG GCGCTTTTTG GCAAGGTAGT
TACAAAGAAA TACAAAAAGA AATGAAGGGC CGTTACCCCA AGCATTATTG GCCAGATGAC
CCCGCCAACG CGGTACCTAC AAGTAAAACC AAAAAGCGTA TGTAA
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| Protein sequence | MLQPFSHLPA YELVTPLKES VAANNIIIGA PPGAGKSTVL PLSLLQSSLK GKILLMQPRR
VVVRNLADYL AKQLNESVGE TVGYRIKGES KTSPATRLEI ITEGVLTRMI QQDPELADVT
AIVFDEFHER SIHSDFGLAL ALEVQTGLRD DLRLIVMSAT LDIAPLQALL NEFSALPVVN
LNTQGRVFPV DIRYTRDVQA YELVPKTCNI IKQAVSEHDG DILVFLPGRG SINAVAREIK
GLAESADIAI HMLYGALSKS AQQDAIAPDP HGRRKVILST NIAETSLTIE GVTVVIDSLW
ENSAQYHPSS DITALTQQRI SQASATQRAG RAGRVMAGIC YRLCSKSSFE RLAKHNAAQI
EKEDLSSFLL DTYAWGSTPD TLALLTKPTP AQLNSAQQKL HRLHAVGFDD ATGQGSITPY
GRQVAQLPCQ PHLAHLLLTV KSGIEGLSPK ENNALKHAAV FVVALSESNM SASGATSVVD
ALLQVSGNAR NQLIQQASRY VRYVTSSTER EQSFKADINA LEEWALGLCI AIAFPLQVGY
LRVRATSGNN ASGSGACSKN ATAGVKQSSQ LLEYKLASGK GAELATSNSS AFNHGDADDS
SPWLAVLEGQ LIKNTVVIRL AQAVPESYLR LAFPKAFSEK RSAVLNRDTG QMEARRSTGF
FAITLNSVPV SGQEKIRDNE YWDGAVTEGW FAYLDALPLS QWPLCDADWQ WWRRVALAGK
LNLQQDKAFD KPDAWPASLS ELVHKAKESL SAALKSCKNI KSLQQLPWKT ALNNGLSWPQ
QDALATHLPT HVSIPTGREA ALDYRESGDV VLAVKMPEMY SQNGPLTIAG GRVTVVCELL
SPAGRPLQTT SDLGAFWQGS YKEIQKEMKG RYPKHYWPDD PANAVPTSKT KKRM
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