| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00423 |
|---|
| Symbol | |
|---|
| ID | 6778038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 438475 |
|---|
| End bp | 439359 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642753852 |
|---|
| Product | predicted permease, DMT superfamily protein |
|---|
| Protein accession | YP_002124735 |
|---|
| Protein GI | 196155246 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGTAT TTGCTGCGCT AGGTACAGCG CTTTGTTGGG CGATTGCTGC CCGTCTTTTC
AGAGGTACGG GCAACGCATT TTCACCGCTT ACCATGAACT TTTGGAAGGG GCTTATTTCT
ATCGCCATTT TAGCGGCAGT ACTGCTAGTG GTTCAGCCTA CAGGGCTTAC CACTAGCACT
GTTTTATGGC TGCTTGTAAG CGGGCTAATT GGTATAGGCA TTGGCGACAC CTGCTTTTTT
AAAGCCCTGC AAAGCATTGG CGATAGCCAA GCTGTGCTGG TTGCCGAAAC CCTTGCGCCG
CTTTTTACGG CCCTTTTCGC TATGGCTTTT ATTGGCGAAT GGATCACCTG GCAACAGTGG
GTCGGCGTAG CCGTTGTTTT GTTTTCTGTC GACATGGTAA TTAAAGCACG CAAGCGCAGT
ACTACCCACG TATTTGCTAC CAGTGGTTAT TTATATGGCG TGGGTGCTGC GCTATGTCAG
GCTATAGGGG CGGTAGTTAG CCGCGACATT TTAAGCGCGG GTGAAATTGA CGCTGCCAGT
GCCGCGTTTT TACGCTTAGT GGGTGGTATG TTTTTTGTCG TCCCCTTTAT TGCGCTTACG
AAAACCCGCT ATATGCCCGT TATTGAAAAT GGCAATCGTG TATGGCCCGC GTTTGTCTTA
GCCACGTTAC TGGGTACTAC TGCCGCAATT TACTTACAAA TGTTTGCTTT TGCCTATGCA
AAAGCCGCCG TTGTTCAAAC GCTTATTGCC ACCAGCGCAT TAATGTCGCT TGGGGTTGCG
TGGGTGCTGG GAGAAAAAGC CACAAGGGCC ACTATTATCT GGTCTGGGGT AGCCCTAATA
GGCGTTGCTA TTTTGGTAAG CTTTGGCGCG CCTTCTGCAC ACTAA
|
|---|
| Protein sequence | MGVFAALGTA LCWAIAARLF RGTGNAFSPL TMNFWKGLIS IAILAAVLLV VQPTGLTTST
VLWLLVSGLI GIGIGDTCFF KALQSIGDSQ AVLVAETLAP LFTALFAMAF IGEWITWQQW
VGVAVVLFSV DMVIKARKRS TTHVFATSGY LYGVGAALCQ AIGAVVSRDI LSAGEIDAAS
AAFLRLVGGM FFVVPFIALT KTRYMPVIEN GNRVWPAFVL ATLLGTTAAI YLQMFAFAYA
KAAVVQTLIA TSALMSLGVA WVLGEKATRA TIIWSGVALI GVAILVSFGA PSAH
|
|---|
| |