| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00388 |
|---|
| Symbol | |
|---|
| ID | 6776683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 409352 |
|---|
| End bp | 409705 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642753817 |
|---|
| Product | putative copper resistance (CopC-like) protein |
|---|
| Protein accession | YP_002124700 |
|---|
| Protein GI | 196155211 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAC TTGTTAAATC ATTTGCAATA TTTAGTGTAC TGCTAAGCAG CGTGGCATTA
GCACATGAGG CTATAGAAAT TAAATCTAGC ACACCAAGCA AAAATGCAAT GCTGATGGAG
GCCCCAATGG AACTATCAGT CAGCTTTACC AAGGGAGTTA GATTAATAAA AGTAGTTTTA
AAAGATAGTG AAGGTGCAAA AGTTGATTTT GGCTTTGAAC CTCCGAAAGA GGTTGCAACG
GATTATTCTT GGACCTTACC TAAATTACGT CCAGGTTCAT ACAATGTTGA GTTCATCATG
CTTGGCTCCG ATGGGCACAA GATGAAAGAT AGTTTTGGAT TTATGGTGCA CTAA
|
|---|
| Protein sequence | MKALVKSFAI FSVLLSSVAL AHEAIEIKSS TPSKNAMLME APMELSVSFT KGVRLIKVVL
KDSEGAKVDF GFEPPKEVAT DYSWTLPKLR PGSYNVEFIM LGSDGHKMKD SFGFMVH
|
|---|
| |