| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00351 |
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| Symbol | |
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| ID | 6777396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 372507 |
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| End bp | 373640 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642753780 |
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| Product | Hydrogenase formation HypD protein |
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| Protein accession | YP_002124663 |
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| Protein GI | 196155174 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.169969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAGTG TTGAATCGTT GCTAAGAGAC ATTAAGAATA CCTCGCTTTC AAAACCGTTT
CGTATTCTTA ATGTTTGCGG TGGCCATGAG CGTGCGATTA CGCGCGCTGG ATTTAGAACG
TTGTTTCAGC ACAATATTCA TCTGATACCT GGGCCAGGGT GCCCCGTTTG TATTTGCCCC
GAAGAGGATA TTGCATACGC GATACACTTA GCCATTAACG AAAATGTCGT TATCGTTAGT
TTTGGTGACA TGCTCCGCGT CCCAGTCGAA CACGAAATGG GTGGCTGTAG CTCATTGATA
GACGCAAAAA ATCAAGGGGC CGATATCCGT CCGATATCTT CTCCTCAAGA AGCGGTATCT
ATAGCATTGG AAGAACCTCG TAAGGTTATT GTGTTTTTTG CTGTTGGTTT TGAAACGACT
ATGGCACCGA TTGCAGCAAC ACTGCTTAAT GATTTACCCA ATAACTTTAA AGTATTATTG
TCTGGACGAC TTACTTGGCC AGCAGTTGCC CATGTGCTTG AGAGTCAACC GAATACTTTT
GATGCACTGA TTGCGCCAGG CCACGTTGCG ACAATTATGG GTAGTGAAGA ATGGCAGTTT
GCAATCGACC ATCATAATTT GCCTGTCAGT ATTGCTGGTT TTCATCCAGA AAGTTTGCTG
TTGTCGCTCC AAACGCTGCT CGGTAATTGT TCAAATAAAG TCGTCACACT GAGTAACCGC
TATCCCGAAG TGGTAAAGCA AAACGGCAAT GCAGCAGCTA AAGCAATAAT CAATAAAGCG
TTCACTATCG TTGACGCACA TTGGCGAGGA ATTGGTGTTA TTCCTGGTTC TGGATTTTCC
TTTGCTTCGA GACTATCGCA CCTAGACGCC ACAAACGATT ATGCGCCAGT CGATTTCCCT
TCGCAATGTG CGCAAAACGT TCCTGAAACC ACATCGCCCT GTGAAAAAGT GATCCTCGGA
AAAATGGCAC CTGATGCGTG CCCGTTTTTT GGTCAGGAAT GCAAACCAGC ATCCCCTAAA
GGCGCATGTA TGGTGTCTGA TGAGGGGGCT TGCCGAATTT GGTATAGCTC TGGTGAGCGC
TCGATAACAA ATGTTATCAA AAAGGGGAAT ACGCTAAAGG TGGAGATGAA GTGA
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| Protein sequence | MYSVESLLRD IKNTSLSKPF RILNVCGGHE RAITRAGFRT LFQHNIHLIP GPGCPVCICP
EEDIAYAIHL AINENVVIVS FGDMLRVPVE HEMGGCSSLI DAKNQGADIR PISSPQEAVS
IALEEPRKVI VFFAVGFETT MAPIAATLLN DLPNNFKVLL SGRLTWPAVA HVLESQPNTF
DALIAPGHVA TIMGSEEWQF AIDHHNLPVS IAGFHPESLL LSLQTLLGNC SNKVVTLSNR
YPEVVKQNGN AAAKAIINKA FTIVDAHWRG IGVIPGSGFS FASRLSHLDA TNDYAPVDFP
SQCAQNVPET TSPCEKVILG KMAPDACPFF GQECKPASPK GACMVSDEGA CRIWYSSGER
SITNVIKKGN TLKVEMK
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