| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00350 |
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| Symbol | |
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| ID | 6777043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 371754 |
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| End bp | 372500 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642753779 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_002124662 |
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| Protein GI | 196155173 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGCGGTA ACTGTGGTTG CGAAACGCAA GTAAAATCAG AGAAAACTGA CAAGCCATCA
GCAAATATCG TTGAGGTTCA CGCAAATTTA AAAAGCAACA ATGACAACCA AGCGATAGCA
AACCGTGCTT TATTTGACGC ACATAATGTA CTAGTGATTA ATTTGATGTC ATCCCCAGGC
AGTGGAAAAA CCAGGCTACT CGAAGAAACG ATACGTGCGC TTAAGTCGCA ATACGCGATG
GCGGTGATTG AAGGCGACCT CGAAACTGAA AATGACGCAA ATAGAATTAG ACGTCATGGT
GTGCAGGCGG AGCAAATCGC CACGGGCCAA GGGTGTCACT TGGACGCCAG TATGGTGCAA
AAGGTACTTG GAAGATTTAG CTTACAAAAA CTAGACGTTT TGTTTATAGA GAATGTTGGC
AATTTGATTT GTCCAGCGTG TTTTGATTTA GGACAGCACT TAAACATTAT TTTGCTGTCC
GTACCAGAAG GTGATGATAA GCCTGAAAAG TACCCAGTGA TGTTTCGTGC CGCGGACGTC
ATGCTTATTT CTAAGACCGA TTACTTGCAA TTTCACGATG AATTCAATGT ACCTCGCGCG
ATTGAATCAT TTCGTAAAGT GGGCAACGAT GCGCCCGTTC TCGAAGTGTC TTCATTGAAA
AGTCAACATC TAGAGCGTTG GTTTTCTTAT TTTACGCACG CCATTACAGC TCATCAGTCT
CAGTCGTTAC AAAATAGCGG AGTCTAA
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| Protein sequence | MCGNCGCETQ VKSEKTDKPS ANIVEVHANL KSNNDNQAIA NRALFDAHNV LVINLMSSPG
SGKTRLLEET IRALKSQYAM AVIEGDLETE NDANRIRRHG VQAEQIATGQ GCHLDASMVQ
KVLGRFSLQK LDVLFIENVG NLICPACFDL GQHLNIILLS VPEGDDKPEK YPVMFRAADV
MLISKTDYLQ FHDEFNVPRA IESFRKVGND APVLEVSSLK SQHLERWFSY FTHAITAHQS
QSLQNSGV
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