| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00324 |
|---|
| Symbol | |
|---|
| ID | 6775813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 352910 |
|---|
| End bp | 353824 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642753753 |
|---|
| Product | putative copper export protein |
|---|
| Protein accession | YP_002124636 |
|---|
| Protein GI | 196155147 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1276] Putative copper export protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.170745 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACATTT GGCAGTTGGG GTTGTTGATT TCAAAGTTTG GTGTTTATCT CGGCGTATCA
GCGCTGCTTG GTGGTGGTTG GATTTTGTGC ATTACCAATA CTGATATTGA CACCAAATTT
ACTTTACCCG CAAGCTTACA AACAACGGTA ACAAGGCACA TGTGTTTGTT TGCGGTCATT
GGCATCATTT TTAGTGCTTT TGACTTTTTG TTTCAGGTTG GGCAGCTCGC TCAATCTGGA
TACGCTGGTA TGTTTGACCC CATTATGCGA GAGATGGTCA CGCATTCAAC GCTCGGAGAT
GTTGCAAAAA GTCGACTAGT GCTGTTCGCA AGTGCGCTAC TATATTTAAC CTACTTAGGT
CATTCAATTA GAAAAAATGC TTTTATTTCA AATCGCTCTC TTGGAATTTT CATTGTTATT
GCGTTGGCAG GATTTGGGTA TACATTTACA TTAACTGGGC ATACTCAACA GTTACAACCT
AGTTTCAAGT TTATCCTGGC TGCTCATGCC GTTATTGCGC TCGCGTGGGT GGGTTCACTC
TGGCCTCTTT CAAGGACGTG CGTAGAGCTT TCTACCCCCA ATTTGCACCA TGTCATGACA
AAATTTGGGA AATCGGCGAT GTACCCCATT GGGGGGCTAA TTATTGCTGG TTTACTACTG
GCTTGGCAAC TTGTGCGTTC TGTTAGCAGT TTGCTCGACA CAAACTACGG CTTTGTATTG
CTTGTTAAGC TGTTGTTTGT TGGTGCCATC TTTCTAATCG CGTTGTTACA CAAACTGCGA
TTGGTTCCTC AGCTTTTAAC CGGCATAACC AGTCCTCGAA CGCTTCAAAA ATCAATCCAA
ATCGAACTTT GTATAGGGAT ATCTATTTTA ATGGTGACGG TGGTGTTAAG TACCGCCGTA
GGCCCCAATT ATTGA
|
|---|
| Protein sequence | MDIWQLGLLI SKFGVYLGVS ALLGGGWILC ITNTDIDTKF TLPASLQTTV TRHMCLFAVI
GIIFSAFDFL FQVGQLAQSG YAGMFDPIMR EMVTHSTLGD VAKSRLVLFA SALLYLTYLG
HSIRKNAFIS NRSLGIFIVI ALAGFGYTFT LTGHTQQLQP SFKFILAAHA VIALAWVGSL
WPLSRTCVEL STPNLHHVMT KFGKSAMYPI GGLIIAGLLL AWQLVRSVSS LLDTNYGFVL
LVKLLFVGAI FLIALLHKLR LVPQLLTGIT SPRTLQKSIQ IELCIGISIL MVTVVLSTAV
GPNY
|
|---|
| |