Gene MADE_00308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00308 
Symbol 
ID6775361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp335703 
End bp336647 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content37% 
IMG OID642753737 
Productpeptidase M56, BlaR1 
Protein accessionYP_002124620 
Protein GI196155131 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATAT TCTTCAACCT GCTAGCAATT TTTACTATTG CATTCGCAAT AACTAATTTG 
GTTGTGTCTA TTGGCGTATC TTTACTAGGA CAAAAGTTAA CATCTGTTCA GTTAAAACCA
AGGAAAGCTC TGCTTTGGTT TTGTGTTTCA ATGCCATGGA TAATGAGCAT TTTAGTCTGT
CTTTACTTAC TTGATATATA TGTCTACTCA AGCATATTTG AAACTAAACA ATATGCTCAT
TGGCATCATA TATCAGATTT CAACTGGTTT AGTTGGCATG CAGTTACAAT AATACTCCTG
CTCTCTTACA TGATGTTTGT ATTGACTTCA AAGACGAGAC AGCTATGGCT TCATAGACAG
GAGGTGAGCT TGCTAACTTG CCTCTCAAAA AACTTAAGCC GGGGGGTATA TGAAGTTGAG
ATACCTAAAT TTGCAGCGTT TACCTCTGGA ATACGGAGCA AGAAATGCTT CATAACTACA
GGGCTTTTGA ATGAGGTTAC TCCCGAAGAA CTTGATGTCA TTTTAAAGCA CGAAAGAGCG
CATGTTGTAA ATAATGATCC CCTGAAAAAG TGGCTTTTTA GTATTTTGGT CTCATTTTAT
TTTGCACCAG TAGCAAGATT ACTAACTCTA CAGATGGTGT TGGCTATGGA ACAAGATGCA
GACAATGCTG TATTAGAAGA AGGAATTGAC CGGATATTCG TTGCAAGCAC TTTAATTAAA
GTTGCAAAGC TGAATGCGCA AGAGGACATA CTTAAATCAA GCGCTTTAGT TGTAAATTTC
GGAGCAGATG TCCTTGAGCA ACGCATCTAT TTCCTCTTGG GTAGGTTGCA GTTGTCACCT
ATCAATAAGA CTGTAGCGTT CTCTTTTGCC ATTGCATTAT TTTTTCTATG TATGACTTCT
TTAGACGGTG TTCATCATCT TATTGAAACG GTGTTTAGCC ATTAA
 
Protein sequence
MTIFFNLLAI FTIAFAITNL VVSIGVSLLG QKLTSVQLKP RKALLWFCVS MPWIMSILVC 
LYLLDIYVYS SIFETKQYAH WHHISDFNWF SWHAVTIILL LSYMMFVLTS KTRQLWLHRQ
EVSLLTCLSK NLSRGVYEVE IPKFAAFTSG IRSKKCFITT GLLNEVTPEE LDVILKHERA
HVVNNDPLKK WLFSILVSFY FAPVARLLTL QMVLAMEQDA DNAVLEEGID RIFVASTLIK
VAKLNAQEDI LKSSALVVNF GADVLEQRIY FLLGRLQLSP INKTVAFSFA IALFFLCMTS
LDGVHHLIET VFSH