| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00295 |
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| Symbol | |
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| ID | 6775435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 320211 |
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| End bp | 321104 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642753724 |
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| Product | site-specific recombinase, phage integrase family protein |
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| Protein accession | YP_002124607 |
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| Protein GI | 196155118 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCAG CTTGCCCCTA TGCGCTGTAT TTAGGTCGAC TTGCGCCTAA TAGTCAGCGC
TCTATTGCTT CACAACTAAA TAGCATCGCA GACATGATGG GTTGGACTGA TGAAGAGCGA
GAAGATAAAT ATCATCATAT CGACTTTCAA CAAGCTACCT ATATCAAAAC GAAACTTATC
ACTCAGGGTT GGTCAGCTAG ATCTATCAAC AGAGCAATGA TAGCAATCAG AAGTATCGTA
AAAATAGCTG TACTGTCTGG GCTCGTACCA GAAATGCAGT CAATTCAACT TCGGGCTATC
AGCAAAGTGA ATCATGGCAA ACATGATGGA AAGCCTCTCT CAACTGAGCA GGTCAATAAG
CTGCTGATAA AGTTACAACG CGATAAATCT GTTCTTGGCA TTCGAAACTA CGCGTTAATC
TCAACACTTT TAGGCACAGG GTTACGACGA AGTGAACTAG TAGCACTCTT GGTAGAAGAC
TTTATCGAAG GTACTGCTCT GATCGTCAGA AAAGGAAAAG GTAACAAGAG CCGAACTGTT
CATCTGCCAG CATGGACGCA ACTTGCGCTG AATCAATGGC TAACACTTCG AAGTAAAAGC
AACGGCCACT TGTTTGTTCG TGTTGCAAAA GGTGGAAATA TTAAACACAA CACCGCGTTG
TCATCGTGCT CTATCTATTC ACTCACTAAA AAGTCGCTAG CATCAATTGG CATAGAAGGA
GTCTCGCCGC ATGACCTTCG ACGAACGTTT ATCACACGAT TACTTGAACA AAATGTAGAT
ATAAACACTG TGCGCCAAAT GGCAGGGCAT GAGGATATCA GTACAACCAT CATGTACGAC
AAGCGAGATG AAAAAGTGAT GAAAGAAGCT GCATCTCTAC TTTCCTATCA ATAA
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| Protein sequence | MNAACPYALY LGRLAPNSQR SIASQLNSIA DMMGWTDEER EDKYHHIDFQ QATYIKTKLI
TQGWSARSIN RAMIAIRSIV KIAVLSGLVP EMQSIQLRAI SKVNHGKHDG KPLSTEQVNK
LLIKLQRDKS VLGIRNYALI STLLGTGLRR SELVALLVED FIEGTALIVR KGKGNKSRTV
HLPAWTQLAL NQWLTLRSKS NGHLFVRVAK GGNIKHNTAL SSCSIYSLTK KSLASIGIEG
VSPHDLRRTF ITRLLEQNVD INTVRQMAGH EDISTTIMYD KRDEKVMKEA ASLLSYQ
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