Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00281 |
Symbol | |
ID | 6779226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 307954 |
End bp | 308652 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642753709 |
Product | putative hydrolase |
Protein accession | YP_002124593 |
Protein GI | 196155104 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.210482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGCACC CTGTTTTGTT TTTTCCCGGT ACACTTTGCG ATGAACGTAT TTTTTTATCG CTATGGCGAC AGTTAAATAT AGCGCAACGC CGCTACGTGC CCCTTCAATG GGCGTCGTCA CAAGAAGAGA TGCTGGCATT AAGCGAAGAC CGTATTCTAG ATAACGAAAA AGTGCATCTA GTGGGCTACT CCATGGGCGG GTTTATTGCC TCGCTGGTGG CACAGCGCAA CCCACATAAT ATCGCATCGG TAACCCTGAT TGGCTATAAC CCTGAAGGCT TGTCAAAAGA GGAAATCGCC AAGCGAAAAC AGCTTACTTC CATGCTTAAG CAAGGGAATT TCAAACCCGA TAACGATGCC TATTTATCCC GTTTTATTCA CCCTTCACGC CTTAACGATG ACAAGGTTGC TGGTGTTGTA AAATCGATGG CCCAAGATCT AGGTAAAACG ACCTTACTTA ATCACACCCT TGCGACTACG CCCCGAGAAA GTACCGTTAA AGCGCTGGCT AAGATCAACG CGCCGACAAC ACTTATTGCT GCTCAACAGG ACGCGATTGC ACCTGCCGCA GCAATAGCGC AACTTAAAGC GCAACTGCCT AAGGCAAACT TTCAAGTCAT AGAAAATGCC GGTCATATGA TGGTGTTAGA GCAAACCGAT GCGGTAGCGT CTATTATTGC AAAACAAATT GGCGTATAA
|
Protein sequence | MQHPVLFFPG TLCDERIFLS LWRQLNIAQR RYVPLQWASS QEEMLALSED RILDNEKVHL VGYSMGGFIA SLVAQRNPHN IASVTLIGYN PEGLSKEEIA KRKQLTSMLK QGNFKPDNDA YLSRFIHPSR LNDDKVAGVV KSMAQDLGKT TLLNHTLATT PRESTVKALA KINAPTTLIA AQQDAIAPAA AIAQLKAQLP KANFQVIENA GHMMVLEQTD AVASIIAKQI GV
|
| |